DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10939 and Tamalin

DIOPT Version :9

Sequence 1:NP_524712.1 Gene:CG10939 / 44155 FlyBaseID:FBgn0010620 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_620249.1 Gene:Tamalin / 192254 RGDID:70554 Length:394 Species:Rattus norvegicus


Alignment Length:267 Identity:52/267 - (19%)
Similarity:98/267 - (36%) Gaps:71/267 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VKRPDFDGYGFNLHS--------EKVKPGQFIGKVDADSPAEAAGLKEGDRILEVNGVSIGSETH 82
            :::.|...:||.:.:        ::|:...|:.:|...|||:.|||..||.|..|||:::....|
  Rat   103 LEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVCRVHESSPAQLAGLTPGDTIASVNGLNVEGIRH 167

  Fly    83 KQVVARIKAIANEVRLLLI---DVDGKALEVKPASPPAAACNGNGSASQNGYEGTKQEMPGASAN 144
            :::|..|||..|.:||..:   .:....||.:                   .:..||.:......
  Rat   168 REIVDIIKASGNVLRLETLYGTSIRKAELEAR-------------------LQYLKQTLYEKWGE 213

  Fly   145 ISSISMVSTKRSSNASSIQSGSTMNASD--------LDVVDRGIPAVAAPVAITPPPVQNGSKPS 201
            ..|: ||..:|..:...::..|..:..:        ..::...:|  ..|:...|...:.||:.:
  Rat   214 YRSL-MVQEQRLVHGLVVKDPSIYDTLESVRSCLYGAGLLPGSLP--FGPLLAAPGGARGGSRRA 275

  Fly   202 SPINNNTLMST-------------PPPPS-----------------ATKAGINNNGSVYNTNGNG 236
            ....::.:..|             ||||:                 |.:|.::.:.||......|
  Rat   276 KGDTDDAVYHTCFFGGAEPQALPPPPPPARAPGPGSAETPASVLCPAPRATLSRSASVRCAGPGG 340

  Fly   237 TNGMTTP 243
            ..|...|
  Rat   341 GGGGGAP 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10939NP_524712.1 PDZ_signaling 20..101 CDD:238492 26/82 (32%)
TamalinNP_620249.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
PDZ_signaling 99..184 CDD:238492 25/80 (31%)
Interaction with PSCD3. /evidence=ECO:0000250 180..257 11/96 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..318 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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