DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10939 and F40F9.3

DIOPT Version :9

Sequence 1:NP_524712.1 Gene:CG10939 / 44155 FlyBaseID:FBgn0010620 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_505503.1 Gene:F40F9.3 / 185542 WormBaseID:WBGene00009581 Length:275 Species:Caenorhabditis elegans


Alignment Length:321 Identity:58/321 - (18%)
Similarity:97/321 - (30%) Gaps:133/321 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PTSPKTPTPPTLPPGVT--------------------KTCHIVKRPDFDGYGFNLHSEKVKPGQF 48
            |.:|||.:....|..|:                    :..||.:|.  .||.:::.:...|||..
 Worm    20 PPAPKTTSAERAPEKVSAEKAQEQEKSAMGSVPIPPEREKHIKERK--TGYEYSIVTINYKPGTK 82

  Fly    49 IGKVDADSPAEAAGLK----EGDRILEVNGVSIGSETHKQVVARIKAIANEVRLLLIDVDGKALE 109
            .|          .|:|    :...:::|.        ...:|:.|..:|:.:    |||||:.:.
 Worm    83 FG----------LGIKNVFNKSIYVIKVE--------ENSLVSGIFNVADRI----IDVDGEPVY 125

  Fly   110 VKPASPPAAACNGNGSASQNGYEGTKQEMPGASANISSISMVSTKRSSNASSIQSGSTMNASDLD 174
                  ..|.|.|                          .:|...:.....::            
 Worm   126 ------DNAKCKG--------------------------LLVKALKEKKVCTL------------ 146

  Fly   175 VVDRGIPAVAAPVA------------ITPPPVQNGSKP--------SSPINNNTLMSTPPPPSAT 219
            :::|||...|...|            :.||.|::..:.        .||...:.....|.|.:.|
 Worm   147 LIERGITESALKDATNEMNEEHTQSVMAPPDVKSIMRKLEAHNFLRKSPSCESAAAPNPVPSAMT 211

  Fly   220 KAGINNNGSVYNTNGNGTNGMTTPTTPPPPTSGYKAGTLHLPMTAAEMRAKLASKKKYDPK 280
            |          |..|.|......      ...|:|  ::.:.|...|.|.||   ||.:||
 Worm   212 K----------NKEGKGERKACI------LEDGHK--SVMIRMDNEENRNKL---KKVEPK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10939NP_524712.1 PDZ_signaling 20..101 CDD:238492 15/104 (14%)
F40F9.3NP_505503.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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