DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10939 and Grip2

DIOPT Version :9

Sequence 1:NP_524712.1 Gene:CG10939 / 44155 FlyBaseID:FBgn0010620 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_612544.2 Gene:Grip2 / 171571 RGDID:621668 Length:1043 Species:Rattus norvegicus


Alignment Length:310 Identity:62/310 - (20%)
Similarity:108/310 - (34%) Gaps:90/310 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PTPPTLPPGVTKTCHIVKRPDFDGYGF--------NLHSEK------VKPGQFIGKVDADSPAEA 60
            |.|...|..::||..:....:.:.:||        :||..:      |:||         .||:.
  Rat   139 PAPENNPRIISKTVDVSLYKEGNSFGFVLRGGAHEDLHKSRPLVLTYVRPG---------GPADR 194

  Fly    61 AG-LKEGDRILEVNGVSIGSETHKQVVARIKAIANEVRLLLIDVDGKALEVKPASPPAAACNGNG 124
            .| ||.|||:|.::|:.:...:|...:|.::..::|. |..::.|        .:.|....|.:|
  Rat   195 EGSLKVGDRLLSIDGIPLHGASHATAIATLQQCSHEA-LFQVEYD--------VATPDTVANASG 250

  Fly   125 SASQNGYEGTKQEMPGASANISSIS-------MVSTKRSSNASSIQSGSTMNASD---------- 172
            ...   .|..|  .||::..||..:       .::..|...||.:.....::|.|          
  Rat   251 PLV---VEIAK--TPGSALGISLTTGSHRNKPAITIDRIKPASVVDRSGALHAGDHILAIDGTST 310

  Fly   173 ----LDVVDRGIPAVAAPVAITPPPVQNGSKPSSPINNNTLMST--------------PPPPSAT 219
                |....:.:.:|...|.:...|.....:|..|.....:..:              .|.||..
  Rat   311 EHCSLVEATKLLASVTEKVRLEILPAPQSRRPLKPPEAVRIQRSEQLHHWDPCVPSCHSPRPSHC 375

  Fly   220 KA------GINNNGSVYNTNGNG---------TNGMTTPTTP--PPPTSG 252
            :|      |.:.:.||.:|..:.         .|..|.|..|  |..|:|
  Rat   376 RAPTWAPGGQDQSRSVSSTPFSSPTMNPAFPCANASTLPRGPMSPRTTAG 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10939NP_524712.1 PDZ_signaling 20..101 CDD:238492 23/95 (24%)
Grip2NP_612544.2 PDZ_signaling 51..133 CDD:238492
PDZ_signaling 153..236 CDD:238492 21/92 (23%)
PDZ_signaling 251..334 CDD:238492 14/87 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..450 14/55 (25%)
PDZ_signaling 456..544 CDD:238492
PDZ_signaling 557..640 CDD:238492
PDZ_signaling 657..737 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 745..769
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 786..863
PDZ_signaling 941..1020 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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