DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10939 and Grid2ip

DIOPT Version :9

Sequence 1:NP_524712.1 Gene:CG10939 / 44155 FlyBaseID:FBgn0010620 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001152793.1 Gene:Grid2ip / 170935 MGIID:2176213 Length:1203 Species:Mus musculus


Alignment Length:424 Identity:77/424 - (18%)
Similarity:120/424 - (28%) Gaps:203/424 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STPTSPKTPTP---------PTLPPGVTKTCHIVKRPDFDGYGFNLHS------EKVKPGQFIGK 51
            :.|..|..|.|         .|.|.|..:|..:.|  ....:||.|..      |.|.||     
Mouse   239 AAPRRPDEPPPRKATSLLGGRTGPGGPRRTVRVYK--GNKSFGFTLRGHGPVWIESVLPG----- 296

  Fly    52 VDADSPAEAAGLKEGDRILEVNGVSIGSETHKQVVARIKA------------------------- 91
                ||||.|.||.|||||.:||:.:.:.:|.:||:.::.                         
Mouse   297 ----SPAENASLKSGDRILFLNGLDMRNCSHDKVVSMLQGSGAMPTLVVEEGPVPFASDSDSLDS 357

  Fly    92 ----------------IANEVRL------------------------------------LLIDV- 103
                            :.:.:|:                                    |::|| 
Mouse   358 PTRASALTSLQWVADILPSSIRVQGRTFSQQLDHLLTPPERYGVCRALERFFQHRNIDTLIVDVY 422

  Fly   104 ------------------------------------------DGKALEVKPASPPAAACNGNGSA 126
                                                      ...:|:::|.|.|          
Mouse   423 PVLDTPAKQVLWQFLYQLLTYEEQELCQEKIACFLGYTAMTEPESSLDLEPESTP---------- 477

  Fly   127 SQNGYEGTKQEMPGASANISSISMVSTKRSSNASSIQSGSTMNASDLDVVDRGIPAVAAPVAITP 191
                 |.|.:..|.:|...||:    .:||..:..:::..:....|...:         |:.:.|
Mouse   478 -----EPTPEPQPRSSLRASSM----CRRSLRSQGLETSLSCGPGDCPEM---------PLPLIP 524

  Fly   192 PPVQNGSKPSSPINNNTLMSTPPPP--SATKAGINNNGSVYNTNGNGTNGMTTPTTPPPP----- 249
            ...|.|...|.|       .||.|.  ||..|.:.   |..|::..|..|..:.:...||     
Mouse   525 GERQAGDGTSLP-------ETPNPKMMSAVYAELE---SRLNSSFKGKIGTMSKSRASPPVPSLV 579

  Fly   250 -TSGYKAGTLHLPMTAAEM---RAKLASKKKYDP 279
             |||        |.|.:.:   ..:|.....|||
Mouse   580 GTSG--------PRTLSGVSWPSDRLLPSPCYDP 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10939NP_524712.1 PDZ_signaling 20..101 CDD:238492 28/163 (17%)
Grid2ipNP_001152793.1 PDZ_signaling 9..69 CDD:238492
HN_L-delphilin-R1_like 122..201 CDD:259820
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..270 8/30 (27%)
PDZ_signaling 269..342 CDD:238492 25/83 (30%)
HN_L-delphilin-R2_like 378..457 CDD:259821 4/78 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..541 21/109 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..586 7/30 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..656
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 710..821
FH2 812..1180 CDD:280362
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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