DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmgs and hmgcs1

DIOPT Version :10

Sequence 1:NP_524711.1 Gene:Hmgs / 44154 FlyBaseID:FBgn0010611 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_957379.2 Gene:hmgcs1 / 394060 ZFINID:ZDB-GENE-040426-1042 Length:526 Species:Danio rerio


Alignment Length:459 Identity:294/459 - (64%)
Similarity:351/459 - (76%) Gaps:5/459 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SHWPENVGIRAIEILFPSQYVDQTELETFDGASAGKYTIGLGQAKMGFCSDREDVNSLCLTVVSR 67
            |.||::|||.|:|:..|||||||.|||.:||..|||||:|||||:|||||||||:||||||||.|
Zfish    18 SMWPKDVGIIAMEVYVPSQYVDQAELEEYDGVGAGKYTVGLGQARMGFCSDREDINSLCLTVVQR 82

  Fly    68 LLERQHVKHSEIGRLEVGTETIVDKSKSVKSVLMQLFAESGNTDIEGIDTTNACYGGTAALFNAV 132
            |:||..:.:..:||||||||||:|||||.|:||||||.||||||:||:|||||||||||||||||
Zfish    83 LMERNGLSYESVGRLEVGTETIIDKSKSTKTVLMQLFEESGNTDVEGVDTTNACYGGTAALFNAV 147

  Fly   133 NWVESSSWDGRLALAVCADIAVYAKGAARPTGGAGAVAMLVGPNAPLILDRGLRATHMEHAYDFY 197
            |||||||||||.||.|..||||||.|:||||||||||||||||||||..:||||.|||:||||||
Zfish   148 NWVESSSWDGRYALVVAGDIAVYATGSARPTGGAGAVAMLVGPNAPLAFERGLRGTHMQHAYDFY 212

  Fly   198 KPDLSSEYPTVDGKLSIQCYLSALDTCYRLYRKKFDQQ-QKDTSKQPASLSTFDAILFHTPFCKL 261
            |||:.||||.|||||||||||||||.||.:|:.|...: |::.::...||..|..::||:|:|||
Zfish   213 KPDMVSEYPVVDGKLSIQCYLSALDQCYSVYKNKIHARWQREGTEGRCSLEDFGFMVFHSPYCKL 277

  Fly   262 VQKSVGRLSFNDFLL-SSEEERTKQFPDLERFNTATLESTYFDRDVEKAFMTQSANIFASKTKKS 325
            ||||:.||..||||. .|....:..|..||.|....:|.||||||||||||..|:.:|..|||.|
Zfish   278 VQKSLARLMLNDFLCHPSPNMESGPFSGLEAFRDVKIEDTYFDRDVEKAFMKASSELFDDKTKAS 342

  Fly   326 LLLANQVGNMYTPSVYSGLVSLLISGPAQELVGKRIGLFSYGSGLAASMYSISVTQD---AAAFE 387
            ||::||.|||||||||..|.|:|.....|:|.|:|||:||||||.||::|||.||||   .:|.:
Zfish   343 LLISNQNGNMYTPSVYGCLASVLAQHTPQQLAGQRIGVFSYGSGFAATLYSIKVTQDGTPGSALD 407

  Fly   388 KFVSQLDYVQPLLNSREKVAPEQFSALMEVREKNNHAAPYTPTGSISALFPGTYYLKDVDALHRR 452
            |.||.|..:...|:||:||:|..|:..|::||:.:|.|.|.|.||:..|||||:||..||..|||
Zfish   408 KLVSSLCDLPARLDSRQKVSPGVFAETMKLREETHHLANYIPQGSVDELFPGTWYLTRVDEKHRR 472

  Fly   453 TYER 456
            .|.|
Zfish   473 QYAR 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgsNP_524711.1 HMG-CoA-S_euk 5..456 CDD:273826 292/455 (64%)
hmgcs1NP_957379.2 HMG-CoA-S_euk 20..477 CDD:273826 293/457 (64%)

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