DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmgs and HMGCS2

DIOPT Version :9

Sequence 1:NP_001286488.1 Gene:Hmgs / 44154 FlyBaseID:FBgn0010611 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_005509.1 Gene:HMGCS2 / 3158 HGNCID:5008 Length:508 Species:Homo sapiens


Alignment Length:458 Identity:276/458 - (60%)
Similarity:339/458 - (74%) Gaps:4/458 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WPENVGIRAIEILFPSQYVDQTELETFDGASAGKYTIGLGQAKMGFCSDREDVNSLCLTVVSRLL 69
            ||::|||.|:|:.||:||||||:||.::...|||||:||||.:|||||.:||:||||||||.||:
Human    50 WPKDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLM 114

  Fly    70 ERQHVKHSEIGRLEVGTETIVDKSKSVKSVLMQLFAESGNTDIEGIDTTNACYGGTAALFNAVNW 134
            ||..:....:||||||||||:||||:||:|||:||.:||||||||||||||||||||:||||.||
Human   115 ERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANW 179

  Fly   135 VESSSWDGRLALAVCADIAVYAKGAARPTGGAGAVAMLVGPNAPLILDRGLRATHMEHAYDFYKP 199
            :||||||||.|:.||.|||||..|.|||||||||||||:||.|||.|:||||.||||:.||||||
Human   180 MESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALERGLRGTHMENVYDFYKP 244

  Fly   200 DLSSEYPTVDGKLSIQCYLSALDTCYRLYRKKFDQQQKDT-SKQPASLSTFDAILFHTPFCKLVQ 263
            :|:||||.|||||||||||.|||.||..||||...|.|.. |.:|.:|.....::|||||||:||
Human   245 NLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIFHTPFCKMVQ 309

  Fly   264 KSVGRLSFNDFLLSSEEERTKQFPDLERFNTATLESTYFDRDVEKAFMTQSANIFASKTKKSLLL 328
            ||:.||.|||||.:|.:.:|..:..||.|....||.||.::|::||.:..|.::|..|||.||.|
Human   310 KSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYL 374

  Fly   329 ANQVGNMYTPSVYSGLVSLLISGPAQELVGKRIGLFSYGSGLAASMYSISVTQDAA---AFEKFV 390
            :...|||||.|:|..|.|||....||||.|.|||.||||||||||.:|..|:||||   ..:|.|
Human   375 STHNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLV 439

  Fly   391 SQLDYVQPLLNSREKVAPEQFSALMEVREKNNHAAPYTPTGSISALFPGTYYLKDVDALHRRTYE 455
            |....:...|.||:.|:||:|:.:|..||:..|...::|.|..::|||||:||:.||..|||.|.
Human   440 SSTSDLPKRLASRKCVSPEEFTEIMNQREQFYHKVNFSPPGDTNSLFPGTWYLERVDEQHRRKYA 504

  Fly   456 RTP 458
            |.|
Human   505 RRP 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgsNP_001286488.1 HMG-CoA-S_euk 5..456 CDD:273826 274/454 (60%)
cond_enzymes 8..178 CDD:299129 122/169 (72%)
HMG_CoA_synt_C 179..456 CDD:285711 148/280 (53%)
HMGCS2NP_005509.1 HMG-CoA-S_euk 50..506 CDD:273826 274/455 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147535
Domainoid 1 1.000 304 1.000 Domainoid score I1380
eggNOG 1 0.900 - - E1_COG3425
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 591 1.000 Inparanoid score I987
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61358
OrthoDB 1 1.010 - - D193643at33208
OrthoFinder 1 1.000 - - FOG0003410
OrthoInspector 1 1.000 - - otm42174
orthoMCL 1 0.900 - - OOG6_101064
Panther 1 1.100 - - O PTHR43323
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2149
SonicParanoid 1 1.000 - - X2306
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.800

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