DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpD5 and TOPP8

DIOPT Version :9

Sequence 1:NP_524707.1 Gene:PpD5 / 44148 FlyBaseID:FBgn0005778 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001330891.1 Gene:TOPP8 / 832846 AraportID:AT5G27840 Length:330 Species:Arabidopsis thaliana


Alignment Length:293 Identity:174/293 - (59%)
Similarity:226/293 - (77%) Gaps:2/293 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LDVIIGQLKTMAVGNRRAGNLSEATITYICQASRELFLSQPMLLELSAPVKICGDLHGQFKDLLR 89
            ||.||.:| ....|.::. .|||:.|..:|..:|::|||||.||:|.||::||||:|||::||||
plant    14 LDDIIRRL-LEGKGGKQV-QLSESEIRQLCFNARQIFLSQPNLLDLHAPIRICGDIHGQYQDLLR 76

  Fly    90 IFQQCGVPPLSNYLFLGDYVDRGHCSIETLSLLLTYKLRYPETFFLLRGNHESADLNRVYGFFDE 154
            :|:..|.||.:||||||||||||..|:||:.|||.||:|||...:|||||||.|.:||:|||:||
plant    77 LFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIYLLRGNHEDAKINRIYGFYDE 141

  Fly   155 CKRRYSIKLWRSFVDCYDCMPVAAIIADRIFCVHGGLSPDLNNLDDIRRLNRPTDVPSDGLLCDL 219
            ||||::::||:.|.||::|:||||:|.::|.|:||||||||:||:.||.:.||.::|..||||||
plant   142 CKRRFNVRLWKVFTDCFNCLPVAALIDEKILCMHGGLSPDLDNLNQIREIQRPIEIPDSGLLCDL 206

  Fly   220 LWSDPDETTGTWASNDRGVSFTFGANIVEGFLMQHKFNLIVRAHQVVEDGYEFFADRQLVTIFSA 284
            ||||||:....||.:|||:|.||||:.|..||.::..:||.|.||||||||||||.|:|||||||
plant   207 LWSDPDQKIEGWADSDRGISCTFGADKVAEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSA 271

  Fly   285 PNYCDIFDNCGAVLVVDAKLVCHFVIIRPRPFS 317
            |||...|||.||:|.||..|||.|.|::|.|.|
plant   272 PNYGGEFDNAGALLSVDESLVCSFEIMKPAPAS 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD5NP_524707.1 PTZ00480 19..339 CDD:185658 174/293 (59%)
MPP_superfamily 25..313 CDD:301300 171/287 (60%)
TOPP8NP_001330891.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 1 1.010 - - D766640at2759
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11668
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.890

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