DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpD5 and TOPP4

DIOPT Version :10

Sequence 1:NP_524707.1 Gene:PpD5 / 44148 FlyBaseID:FBgn0005778 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_181514.1 Gene:TOPP4 / 818571 AraportID:AT2G39840 Length:321 Species:Arabidopsis thaliana


Alignment Length:312 Identity:180/312 - (57%)
Similarity:236/312 - (75%) Gaps:9/312 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 STVLSTGKESSKEEKNRMSQLDVIIGQLKTMAVGNRRAG---NLSEATITYICQASRELFLSQPM 66
            :|..:.|::::.:.    :.||.||.:|..:.:.  |.|   .||||.|..:|..:|::||.||.
plant     3 TTTTTQGQQTAIDS----AVLDDIIRRLTEVRLA--RPGKQVQLSEAEIKQLCTTARDIFLQQPN 61

  Fly    67 LLELSAPVKICGDLHGQFKDLLRIFQQCGVPPLSNYLFLGDYVDRGHCSIETLSLLLTYKLRYPE 131
            ||||.||:|||||:|||:.||||:|:..|.||.:||||||||||||..|:||:.|||.||::||.
plant    62 LLELEAPIKICGDIHGQYSDLLRLFEYGGFPPSANYLFLGDYVDRGKQSLETICLLLAYKIKYPG 126

  Fly   132 TFFLLRGNHESADLNRVYGFFDECKRRYSIKLWRSFVDCYDCMPVAAIIADRIFCVHGGLSPDLN 196
            .|||||||||.|.:||:|||:||||||:::::|:.|.||::|:||||:|.|:|.|:||||||||:
plant   127 NFFLLRGNHECASINRIYGFYDECKRRFNVRVWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLD 191

  Fly   197 NLDDIRRLNRPTDVPSDGLLCDLLWSDPDETTGTWASNDRGVSFTFGANIVEGFLMQHKFNLIVR 261
            :||:||.|.|||.:|..|||||||||||.:....|..||||||:|||.:.|..||.:|..:|:.|
plant   192 HLDEIRNLPRPTMIPDTGLLCDLLWSDPGKDVKGWGMNDRGVSYTFGPDKVSEFLTKHDLDLVCR 256

  Fly   262 AHQVVEDGYEFFADRQLVTIFSAPNYCDIFDNCGAVLVVDAKLVCHFVIIRP 313
            |||||||||||||||||||:|||||||..|||.||::.||..|:|.|.|::|
plant   257 AHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQILKP 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD5NP_524707.1 MPP_superfamily 25..313 CDD:472684 177/290 (61%)
TOPP4NP_181514.1 MPP_PP1_PPKL 18..308 CDD:277359 177/291 (61%)

Return to query results.
Submit another query.