DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpD5 and ppp3ccb

DIOPT Version :9

Sequence 1:NP_524707.1 Gene:PpD5 / 44148 FlyBaseID:FBgn0005778 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_005155370.1 Gene:ppp3ccb / 565241 ZFINID:ZDB-GENE-070112-1102 Length:511 Species:Danio rerio


Alignment Length:333 Identity:122/333 - (36%)
Similarity:186/333 - (55%) Gaps:34/333 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TVLSTGKESSKEEKNRMSQLDVIIGQLKTMAVGNRRAGNLSEATITYICQASRELFLSQPMLLEL 70
            |...|.||..::.|.:       :..||:..|   :.|.|.|.....|......:...:..:||:
Zfish    24 TTRLTMKELYEDGKPK-------VELLKSHLV---KEGRLEEDVALRIINDGANILRHEKCMLEV 78

  Fly    71 SAPVKICGDLHGQFKDLLRIFQQCGVPPLSNYLFLGDYVDRGHCSIETLSLLLTYKLRYPETFFL 135
            .||:.:|||:||||.||:::|:..|.|..:.|||||||||||:.|||.:..|...|:.:|.|.||
Zfish    79 EAPITVCGDVHGQFFDLMKLFEVGGSPHNTRYLFLGDYVDRGYFSIECVLYLWALKINHPTTLFL 143

  Fly   136 LRGNHESADLNRVYGFFDECKRRYSIKLWRSFVDCYDCMPVAAIIADRIFCVHGGLSPDLNNLDD 200
            ||||||...|...:.|..|||.:|:.:::.:.::.:||:|:||::..:..||||||||::..|||
Zfish   144 LRGNHECRHLTEYFTFKQECKIKYTERVYDACMEAFDCLPLAALLNQQFLCVHGGLSPEVTCLDD 208

  Fly   201 IRRLNRPTDVPSDGLLCDLLWSDPDETTGTWASND-------RGVSFTFGANIVEGFLMQHKFNL 258
            ||:|:|..:.|:.|.:||||||||.|..|:..:::       ||.|:.:....|..||..:....
Zfish   209 IRKLDRFKEPPAFGPMCDLLWSDPGEDYGSEKTSEHFCHNSVRGCSYFYSYPAVCDFLTNNNLLS 273

  Fly   259 IVRAHQVVEDGYEFFADRQ------LVTIFSAPNYCDIFDNCGAVLVVDAKLV------CHFVII 311
            ::|||:..:.||..:...|      |:||||||||.|:::|..|||..:..::      |     
Zfish   274 VIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNC----- 333

  Fly   312 RPRPFSRP 319
            .|.|:..|
Zfish   334 SPHPYWLP 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD5NP_524707.1 PTZ00480 19..339 CDD:185658 118/320 (37%)
MPP_superfamily 25..313 CDD:301300 114/306 (37%)
ppp3ccbXP_005155370.1 MPP_PP2B 38..342 CDD:277361 117/319 (37%)
PP2Ac 55..326 CDD:197547 108/270 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.