back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment PpD5 and Ppp5c

DIOPT Version :9

Sequence 1:	NP_524707.1	Gene:	PpD5 / 44148	FlyBaseID:	FBgn0005778	Length:	346	Species:	Drosophila melanogaster
Sequence 2:	NP_035285.2	Gene:	Ppp5c / 19060	MGIID:	102666	Length:	499	Species:	Mus musculus

Alignment Length:	339	Identity:	120/339 - (35%)
Similarity:	188/339 - (55%)	Gaps:	38/339 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly    18 EKNRMSQLDVIIGQLKTMAVGNRRAGNLSE---ATITYI----------------CQASRELFLS 63
            :::|.|.:|.:  .:::|.:.:..:|...|   .|||::                | |.:.|...
Mouse   155 DEHRRSVVDSL--DIESMTIEDEYSGPKLEDGKVTITFMKDLMQWYKDQKKLHRKC-AYQILVQV 216

  Fly    64 QPMLLELSAPVK----------ICGDLHGQFKDLLRIFQQCGVPPLSN-YLFLGDYVDRGHCSIE 117
            :.:|.:||..|:          :|||.||||.|||.||:..|:|..:| |:|.||:||||..|:|
Mouse   217 KEVLCKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVE 281

  Fly   118 TLSLLLTYKLRYPETFFLLRGNHESADLNRVYGFFDECKRRYSIKLWRSFVDCYDCMPVAAIIAD 182
            .:..|..:||.||:.|.|||||||:.::|::|||..|.|.:|:.:::..|.:.::.:|:|..|..
Mouse   282 VILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCING 346

  Fly   183 RIFCVHGGL-SPDLNNLDDIRRLNRPTDVPSDGLLCDLLWSDPDETTGTWASNDRGVSFTFGANI 246
            ::..:|||| |.|...|||||::.|....|..|.:||||||||....|...|. ||||..||.::
Mouse   347 KVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSVSK-RGVSCQFGPDV 410

  Fly   247 VEGFLMQHKFNLIVRAHQVVEDGYEFFADRQLVTIFSAPNYCDIFDNCGAVLVV---DAKLVCHF 308
            .:.||.:::.:.|:|:|:|..:|||.....:.||:||||||||...|..:.:.:   |.:...|.
Mouse   411 TKAFLEENQLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQ 475

  Fly   309 VIIRPRPFSRPTGF 322
            ....|.|..:|..:
Mouse   476 FTAVPHPNVKPMAY 489

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.