DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpD5 and F20D6.6

DIOPT Version :9

Sequence 1:NP_524707.1 Gene:PpD5 / 44148 FlyBaseID:FBgn0005778 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_505103.2 Gene:F20D6.6 / 184725 WormBaseID:WBGene00017636 Length:316 Species:Caenorhabditis elegans


Alignment Length:267 Identity:72/267 - (26%)
Similarity:125/267 - (46%) Gaps:40/267 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 FLSQPMLLE--------------LSAPVKICGDLHGQFKDLLRIFQQCGVPPLSNYLFLGDYVDR 111
            |||:  |||              ::.||.||||:..::.|:|.||:.||.|....|:|||:.:|.
 Worm    36 FLSE--LLEDALEIMDGTSRVEYITPPVNICGDIRSRYGDVLDIFKTCGWPFEQKYVFLGNLIDG 98

  Fly   112 GHCSIETLSLLLTYKLRYPETFFLLRGNHESADLNRVYGFFDECKRRY-SIKLWRS----FVDCY 171
            |..|:|||.:||..|:.||:.|.:|||.:|...:.....|..|.:.|: ....|::    .....
 Worm    99 GKFSLETLVILLCCKICYPQNFVILRGFYEHELVKSDRSFIGELRVRFPDSNKWQALNAIIKSLL 163

  Fly   172 DCMPVAAIIADRIFCVHGGLSPDLNNLDDIRRL-------NRPTDVPSDGLLCDLLWSDPDETTG 229
            ..:||..::..::.||:|.::.::.|..::..:       |..|.|....|..|:    |...|.
 Worm   164 KRLPVMTVLNRKLLCVNGMVTSNIKNEKNVVSVKNGNMFENHNTRVEVQFLDIDI----PSPVTP 224

  Fly   230 TWASNDRGVSFTFGANIVEGFLMQHKFNLIVRAHQVVEDGYEFFADRQLVTIFSAPNYCDIFDNC 294
            .....:        :.|::..|.....::::.::.||.:||.|....||:||.|.......::|.
 Worm   225 NKIDEE--------SKIIKELLKSMDMSMMINSNNVVREGYRFTLKNQLITITSGTKLQKNYNNR 281

  Fly   295 GAVLVVD 301
            |.|:::|
 Worm   282 GVVMMMD 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD5NP_524707.1 PTZ00480 19..339 CDD:185658 72/267 (27%)
MPP_superfamily 25..313 CDD:301300 72/267 (27%)
F20D6.6NP_505103.2 MPP_superfamily 39..285 CDD:387346 67/259 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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