DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD5 and pef-1

DIOPT Version :9

Sequence 1:NP_524707.1 Gene:PpD5 / 44148 FlyBaseID:FBgn0005778 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_741091.1 Gene:pef-1 / 175257 WormBaseID:WBGene00003969 Length:707 Species:Caenorhabditis elegans


Alignment Length:290 Identity:104/290 - (35%)
Similarity:147/290 - (50%) Gaps:30/290 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ITYICQASRELFLSQPMLLELSA----PVKICGDLHGQFKDLLRIFQQCGVPPLSN-YLFLGDYV 109
            :..|...:|::|.:.|.:..:|.    .|.|||||||:|.||..|..:.|.|.:.| |:|.||:|
 Worm   223 VLMILHEARKIFKAMPSVSRISTSISNQVTICGDLHGKFDDLCIILYKNGYPSVDNPYIFNGDFV 287

  Fly   110 DRGHCSIETLSLLLTYKLRYPETFFLLRGNHESADLNRVYGFFDECKRRY---SIKLWRSFVDCY 171
            |||..|||.|.:|....:..|.:.:|.|||||...:|..|||..|...:|   |..:.|...|.:
 Worm   288 DRGGQSIEVLCVLFALVIVDPMSIYLNRGNHEDHIMNLRYGFIKELSTKYKDLSTPITRLLEDVF 352

  Fly   172 DCMPVAAIIADRIFCVHGGLS--PDLNNLDDIRR-------------------LNRPTDVPSDGL 215
            ..:|:|.||...||.||||:|  .:::.||.|.|                   .|...:|.....
 Worm   353 SWLPIATIIDRDIFVVHGGISDQTEVSKLDKIPRHRFQSVLRPPVNKGMESEKENSAVNVDEWKQ 417

  Fly   216 LCDLLWSDPDETTGTWASNDRGVSFTFGANIVEGFLMQHKFNLIVRAHQVVEDGYEFFADRQLVT 280
            :.|::||||.:..|.|.:..||....|||:|...||.:|.|.|:||:|:...:||||..:...:|
 Worm   418 MLDIMWSDPKQNKGCWPNVFRGGGSYFGADITASFLEKHGFRLLVRSHECKFEGYEFSHNNTCLT 482

  Fly   281 IFSAPNYCDIFDNCGA-VLVVDAKLVCHFV 309
            :|||.||.:...|.|| |..:......|||
 Worm   483 VFSASNYYETGSNRGAYVKFIGKSKQPHFV 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD5NP_524707.1 PTZ00480 19..339 CDD:185658 104/290 (36%)
MPP_superfamily 25..313 CDD:301300 104/290 (36%)
pef-1NP_741091.1 MPP_RdgC 199..515 CDD:277364 104/290 (36%)
PP2Ac 218..514 CDD:197547 104/290 (36%)
EFh 634..699 CDD:238008
EF-hand_7 634..698 CDD:290234
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3051
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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