DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD5 and gsp-3

DIOPT Version :9

Sequence 1:NP_524707.1 Gene:PpD5 / 44148 FlyBaseID:FBgn0005778 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_491429.1 Gene:gsp-3 / 172082 WormBaseID:WBGene00021113 Length:305 Species:Caenorhabditis elegans


Alignment Length:303 Identity:149/303 - (49%)
Similarity:202/303 - (66%) Gaps:7/303 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NRMSQLDVIIGQLKTMAVGNRRAGNLSEATITYICQASRELFLSQPMLLELSAPVKICGDLHGQF 84
            |.||:|      |.....|.|...:::|..:...|..::.:|.||..|||:..|:.:|||:|||:
 Worm     9 NLMSRL------LNVGMSGGRLTTSVNEQELQTCCAVAKSVFASQASLLEVEPPIIVCGDIHGQY 67

  Fly    85 KDLLRIFQQCGVPPLSNYLFLGDYVDRGHCSIETLSLLLTYKLRYPETFFLLRGNHESADLNRVY 149
            .||||||.:.|.||..|:||||||||||..:|||:.|:|.:|::|||.||:||||||...:||||
 Worm    68 SDLLRIFDKNGFPPDVNFLFLGDYVDRGRQNIETICLMLCFKIKYPENFFMLRGNHECPAINRVY 132

  Fly   150 GFFDECKRRY-SIKLWRSFVDCYDCMPVAAIIADRIFCVHGGLSPDLNNLDDIRRLNRPTDVPSD 213
            ||::||.||| |.:||..|.|.::.||:..:|..||.|:||||||.|..||.:|:|.||.|.|:.
 Worm   133 GFYEECNRRYKSTRLWSIFQDTFNWMPLCGLIGSRILCMHGGLSPHLQTLDQLRQLPRPQDPPNP 197

  Fly   214 GLLCDLLWSDPDETTGTWASNDRGVSFTFGANIVEGFLMQHKFNLIVRAHQVVEDGYEFFADRQL 278
            .:..||||:|||:....|.:|.||||:.||.::|.....:...:|:.||||||:|||||||.:::
 Worm   198 SIGIDLLWADPDQWVKGWQANTRGVSYVFGQDVVADVCSRLDIDLVARAHQVVQDGYEFFASKKM 262

  Fly   279 VTIFSAPNYCDIFDNCGAVLVVDAKLVCHFVIIRPRPFSRPTG 321
            |||||||:||..|||..|.:.||..:||.||:.:|.|.|...|
 Worm   263 VTIFSAPHYCGQFDNSAATMKVDENMVCTFVMYKPTPKSMRRG 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD5NP_524707.1 PTZ00480 19..339 CDD:185658 149/303 (49%)
MPP_superfamily 25..313 CDD:301300 142/288 (49%)
gsp-3NP_491429.1 MPP_superfamily 6..297 CDD:301300 145/293 (49%)
PP2Ac 29..299 CDD:197547 139/269 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 1 1.010 - - D327461at33208
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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