DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD5 and gsp-4

DIOPT Version :9

Sequence 1:NP_524707.1 Gene:PpD5 / 44148 FlyBaseID:FBgn0005778 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001379823.1 Gene:gsp-4 / 171960 WormBaseID:WBGene00020187 Length:305 Species:Caenorhabditis elegans


Alignment Length:303 Identity:148/303 - (48%)
Similarity:201/303 - (66%) Gaps:7/303 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NRMSQLDVIIGQLKTMAVGNRRAGNLSEATITYICQASRELFLSQPMLLELSAPVKICGDLHGQF 84
            |.||:|      |.....|.|...:::|..:...|..::.:|.||..|||:..|:.:|||:|||:
 Worm     9 NLMSRL------LNVGMSGGRLTTSVNEQELQTCCAVAKSVFASQASLLEVEPPIIVCGDIHGQY 67

  Fly    85 KDLLRIFQQCGVPPLSNYLFLGDYVDRGHCSIETLSLLLTYKLRYPETFFLLRGNHESADLNRVY 149
            .||||||.:.|.||..|:||||||||||..:|||:.|:..:|::|||.||:||||||...:||||
 Worm    68 SDLLRIFDKNGFPPDINFLFLGDYVDRGRQNIETICLMFCFKIKYPENFFMLRGNHECPAINRVY 132

  Fly   150 GFFDECKRRY-SIKLWRSFVDCYDCMPVAAIIADRIFCVHGGLSPDLNNLDDIRRLNRPTDVPSD 213
            ||::||.||| |.:||..|.|.::.||:..:|..||.|:||||||.|..||.:|:|.||.|.|:.
 Worm   133 GFYEECNRRYKSTRLWSIFQDTFNWMPLCGLIGSRILCMHGGLSPHLQTLDQLRQLPRPQDPPNP 197

  Fly   214 GLLCDLLWSDPDETTGTWASNDRGVSFTFGANIVEGFLMQHKFNLIVRAHQVVEDGYEFFADRQL 278
            .:..||||:|||:....|.:|.||||:.||.::|.....:...:|:.||||||:|||||||.:::
 Worm   198 SIGIDLLWADPDQWVKGWQANTRGVSYVFGQDVVADVCSRLDIDLVARAHQVVQDGYEFFASKKM 262

  Fly   279 VTIFSAPNYCDIFDNCGAVLVVDAKLVCHFVIIRPRPFSRPTG 321
            |||||||:||..|||..|.:.||..:||.||:.:|.|.|...|
 Worm   263 VTIFSAPHYCGQFDNSAATMKVDENMVCTFVMYKPTPKSLRKG 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD5NP_524707.1 PTZ00480 19..339 CDD:185658 148/303 (49%)
MPP_superfamily 25..313 CDD:301300 141/288 (49%)
gsp-4NP_001379823.1 MPP_superfamily 6..297 CDD:417454 144/293 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 1 1.010 - - D327461at33208
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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