DRSC/TRiP Functional Genomics Resources

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Protein Alignment slmo and UPS2

DIOPT Version :10

Sequence 1:NP_524705.1 Gene:slmo / 44132 FlyBaseID:FBgn0029161 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_013269.1 Gene:UPS2 / 850865 SGDID:S000004158 Length:230 Species:Saccharomyces cerevisiae


Alignment Length:219 Identity:69/219 - (31%)
Similarity:111/219 - (50%) Gaps:23/219 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVD--GVLHTHRLVQSKWYFPKW 63
            ||::.:.:.||:||:.||.|.|:||||.::..:|..||:.|.:.|  .||.|.||:..|...|||
Yeast     1 MKLFQNSYDFNYPWDQVTAANWKKYPNEISTHVIAVDVLRRELKDQGKVLVTERLITVKQGVPKW 65

  Fly    64 THALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSD-ASKTLLKQEAT 127
            ...::|........|.|.||..:|.:.:::.|||.|..:.|.|.:.|.|||.| |:|||.:|||.
Yeast    66 IMMMLGGTNMSHVREVSVVDLNKKSLTMRSCNLTMCNLLKVYETVTYSPHPDDSANKTLFQQEAQ 130

  Fly   128 VTVFGV--PLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEVKGIARGTDELLHNTRRSIDEV 190
            :|.:|.  .|.:.|||........||.||:.|.:.|:.:.:              .|..:.:|::
Yeast   131 ITAYGSIRKLCNKMEDWSVQRFCENAKKGKMGFDAVLQVFS--------------ENWEKHVDDL 181

  Fly   191 T----ESARKSMDEISAQAAKAAK 210
            :    ....::|:::...|....|
Yeast   182 SNQLVSKVNETMEDVKISAGTLLK 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slmoNP_524705.1 PRELI 15..168 CDD:398400 58/157 (37%)
UPS2NP_013269.1 PRELI 15..172 CDD:398400 58/170 (34%)

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