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Protein Alignment slmo and Prelid3a
DIOPT Version :9
| Sequence 1: | NP_001097094.1 |
Gene: | slmo / 44132 |
FlyBaseID: | FBgn0029161 |
Length: | 215 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_038953059.1 |
Gene: | Prelid3a / 690253 |
RGDID: | 1582858 |
Length: | 305 |
Species: | Rattus norvegicus |
| Alignment Length: | 175 |
Identity: | 76/175 - (43%) |
| Similarity: | 106/175 - (60%) |
Gaps: | 23/175 - (13%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 HIFN--------HPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGV--LHTHRLVQSKWYFPK 62
|||| |||:||.:||.|||||||.|.::|.||:||. |||. ||:.||:.::|..|.
Rat 122 HIFNPALRRQSSHPWDTVIKAAMRKYPNPMNPCVVGVDVLERS-VDGYGRLHSLRLLSTEWGLPG 185
Fly 63 WTHALIGTAKT-CFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEA 126
...|::|..:| .:..|||.|||..::|.|.:.|:|....:||:|.|.|.|||.:..||:|.|||
Rat 186 LVRAILGANRTLTYIKERSVVDPAARKMELCSTNITLTNLVSVNERLVYTPHPENPEKTVLTQEA 250
Fly 127 TVTVFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEVKG 171
.:||.|:.|..|:|.|:.:|||:||.| ::|.|:|
Rat 251 IITVKGISLGSYLESLMATTISSNAKK-----------VHTSVEG 284
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| slmo | NP_001097094.1 |
PRELI |
15..168 |
CDD:398400 |
66/155 (43%) |
| Prelid3a | XP_038953059.1 |
POM121 |
<6..101 |
CDD:405826 |
|
| PRELI |
137..277 |
CDD:398400 |
65/140 (46%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
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