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Protein Alignment slmo and Prelid2
DIOPT Version :9
Sequence 1: | NP_001097094.1 |
Gene: | slmo / 44132 |
FlyBaseID: | FBgn0029161 |
Length: | 215 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001258262.1 |
Gene: | Prelid2 / 681037 |
RGDID: | 1584707 |
Length: | 177 |
Species: | Rattus norvegicus |
Alignment Length: | 158 |
Identity: | 34/158 - (21%) |
Similarity: | 74/158 - (46%) |
Gaps: | 4/158 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 IFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVD--GVLHTHRLVQSKWYFPKWTHAL-IGT 70
:|.:|:|.|.....|||||||..::|....||.:..: |:::..|:...:...|:....: |..
Rat 10 VFQYPFEQVVACFLRKYPNPMDKNVISVKTVEEKKDESTGLIYRKRIAICQNVVPEVLRKVSILK 74
Fly 71 AKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEATVTVFGVP- 134
.......|.|.:..:::.|.::::.||:.:..|:.|...:.....:.:.|...|...:::.|..
Rat 75 VPDIQLEEESWLSLQKRNMAIRSHCLTWTQYASMREESVFRESVENPNWTEFIQTGRISITGAGF 139
Fly 135 LSHYMEDLLTSTISTNAGKGRQGLEWVI 162
|:..:|...::.:...|.||.:.:|.::
Rat 140 LNCILETFASTFLRQGAQKGIRIMEMLL 167
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
slmo | NP_001097094.1 |
PRELI |
15..168 |
CDD:398400 |
32/152 (21%) |
Prelid2 | NP_001258262.1 |
PRELI |
16..173 |
CDD:282550 |
32/152 (21%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166336845 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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