DRSC/TRiP Functional Genomics Resources

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Protein Alignment slmo and Prelid1

DIOPT Version :10

Sequence 1:NP_524705.1 Gene:slmo / 44132 FlyBaseID:FBgn0029161 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_079872.4 Gene:Prelid1 / 66494 MGIID:1913744 Length:217 Species:Mus musculus


Alignment Length:214 Identity:53/214 - (24%)
Similarity:102/214 - (47%) Gaps:12/214 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVV-DGVLHTHRLVQSKWYFPKWT 64
            :|.:..:.:....|:.|..|.|::||||.:..::..|:|.|.|. |..|.:.||:......|:|.
Mouse     2 VKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTNRMPRWA 66

  Fly    65 HALI--GTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEAT 127
            ..|.  ..|.:.:..|.|.|||:.:.|...|.|:...|.:.|:|...|..:..::..|.:::||.
Mouse    67 ERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDNSGWTEIRREAW 131

  Fly   128 V--TVFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEVKGIARGTDELLHNTRRSIDEV 190
            |  ::|||  |..:::...:...:|..|..:|.|:::..:..|..     :..|:...:.:.::.
Mouse   132 VSSSLFGV--SRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEAP-----SKTLVETAKEAKEKA 189

  Fly   191 TESARKSMDEISAQAAKAA 209
            .|:|..:.::....|.|||
Mouse   190 KETALAATEKAKDLANKAA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slmoNP_524705.1 PRELI 15..168 CDD:398400 43/157 (27%)
Prelid1NP_079872.4 PRELI 16..172 CDD:398400 43/157 (27%)

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