DRSC/TRiP Functional Genomics Resources

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Protein Alignment slmo and Prelid3b

DIOPT Version :10

Sequence 1:NP_524705.1 Gene:slmo / 44132 FlyBaseID:FBgn0029161 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_079807.1 Gene:Prelid3b / 66390 MGIID:1913640 Length:195 Species:Mus musculus


Alignment Length:208 Identity:102/208 - (49%)
Similarity:133/208 - (63%) Gaps:20/208 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRV-VDGVLHTHRLVQSKWYFPKWT 64
            ||||||||:|:|||||||.||.:||||||.||::|.||::|.| ..|.||:|||:.::|..|...
Mouse     1 MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHVDPSGKLHSHRLLSTEWGLPSIV 65

  Fly    65 HALIGTAKT-CFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEATV 128
            .:|||.|:| .:..|.|.|||..:.|.||:.|::|...:||||.|.|:||..|..||:|.|||.:
Mouse    66 KSLIGAARTKTYVQEHSVVDPVTRTMELKSTNISFTNMVSVDERLTYKPHLQDPEKTVLTQEALI 130

  Fly   129 TVFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEVKGIARGTDELLHNTRRSIDEVTES 193
            ||.||.||.|:|.|:.||||:||.|||:.:||||..:|.|                  |:|:..|
Mouse   131 TVKGVSLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE------------------IEELAAS 177

  Fly   194 ARKSMDEISAQAA 206
            ||.|:....|.||
Mouse   178 ARGSIRTPMAAAA 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slmoNP_524705.1 PRELI 15..168 CDD:398400 80/154 (52%)
Prelid3bNP_079807.1 PRELI 15..170 CDD:398400 80/154 (52%)

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