DRSC/TRiP Functional Genomics Resources

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Protein Alignment slmo and prelid3a

DIOPT Version :9

Sequence 1:NP_001097094.1 Gene:slmo / 44132 FlyBaseID:FBgn0029161 Length:215 Species:Drosophila melanogaster
Sequence 2:XP_691726.1 Gene:prelid3a / 563270 ZFINID:ZDB-GENE-130530-654 Length:175 Species:Danio rerio


Alignment Length:164 Identity:84/164 - (51%)
Similarity:114/164 - (69%) Gaps:2/164 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRV-VDGVLHTHRLVQSKWYFPKWT 64
            ||||::||||::|||||.:||.|||||||.||::|.||::|.: ..|.||:|||:.::|..|...
Zfish     1 MKIWSTEHIFSYPWETVIKAAMRKYPNPMNPSVVGVDVLDRNLDTHGRLHSHRLLSTEWGLPGVV 65

  Fly    65 HALIGTAKT-CFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEATV 128
            .|::||::| .:..|.|.||||.|:|.|.:.|:|....|||||.|.|.|||.:...|:|.|||.:
Zfish    66 KAILGTSRTVTYVKEHSIVDPEEKKMELCSTNITLTNLISVDERLVYRPHPDNPEVTVLTQEAII 130

  Fly   129 TVFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVI 162
            ||.||.||.|:|.|:..|:|.||.||...:||:|
Zfish   131 TVKGVSLSSYLEGLMALTMSANARKGWDAIEWII 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slmoNP_001097094.1 PRELI 15..168 CDD:398400 74/150 (49%)
prelid3aXP_691726.1 PRELI 15..170 CDD:282550 74/150 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575997
Domainoid 1 1.000 165 1.000 Domainoid score I3870
eggNOG 1 0.900 - - E1_KOG3336
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 207 1.000 Inparanoid score I3679
OMA 1 1.010 - - QHG54780
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002094
OrthoInspector 1 1.000 - - otm24940
orthoMCL 1 0.900 - - OOG6_102353
Panther 1 1.100 - - O PTHR11158
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1609
SonicParanoid 1 1.000 - - X1543
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.830

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