DRSC/TRiP Functional Genomics Resources

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Protein Alignment slmo and prelid1b

DIOPT Version :10

Sequence 1:NP_524705.1 Gene:slmo / 44132 FlyBaseID:FBgn0029161 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_001018515.1 Gene:prelid1b / 553707 ZFINID:ZDB-GENE-050522-169 Length:199 Species:Danio rerio


Alignment Length:164 Identity:40/164 - (24%)
Similarity:76/164 - (46%) Gaps:5/164 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVV-DGVLHTHRLVQSKWYFPKWTH 65
            |.:.||....:.|:.|..|.|::||||.:..::..||:.|:|. :.:|.:.||.......|:|..
Zfish     3 KYFFSETEIKNSWDLVLTAFWQRYPNPFSSHVLTEDVLFRKVTSENLLVSRRLFTKTNRLPRWAE 67

  Fly    66 ALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEATVT- 129
            .:....::.:..|.|.||...:.:...|.|:...:.:.|.|...:.........|.:.::|.:: 
Zfish    68 RIFPGRRSVYIIEDSVVDLSNRSLTTMTWNVNHAKLMRVVERCVFTGEQDRPVWTHITRQAWISS 132

  Fly   130 -VFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVI 162
             |||  ||..:::...:...:|..|..:|:|..|
Zfish   133 GVFG--LSRPIQEFGLARFRSNQLKAMKGMEHAI 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slmoNP_524705.1 PRELI 15..168 CDD:398400 36/151 (24%)
prelid1bNP_001018515.1 PRELI 16..170 CDD:398400 36/151 (24%)

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