DRSC/TRiP Functional Genomics Resources

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Protein Alignment slmo and prelid2

DIOPT Version :10

Sequence 1:NP_524705.1 Gene:slmo / 44132 FlyBaseID:FBgn0029161 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_001016922.1 Gene:prelid2 / 549676 XenbaseID:XB-GENE-943679 Length:176 Species:Xenopus tropicalis


Alignment Length:158 Identity:33/158 - (20%)
Similarity:71/158 - (44%) Gaps:4/158 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRV--VDGVLHTHRLVQSKWYFPKW-THALIGT 70
            ::.:|::.|..:...|||.|:...::....||.:.  ..||::..|:.......|.: ....|..
 Frog    10 VYPYPFQHVVTSYLNKYPTPLEKHVLSVKTVEEKTDPATGVVYRKRIATCNNVIPSFLRRCSILK 74

  Fly    71 AKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEATVTVFGVP- 134
            ....:..|.|.:|.:.:.|.|:|:.||:.:..::.|...|:....:::.|...|:.|:|:.|.. 
 Frog    75 VSNVYLEEESWLDMKTRVMTLETHCLTWAQYATMKEESVYKECTENSNWTEFTQKGTITITGAGF 139

  Fly   135 LSHYMEDLLTSTISTNAGKGRQGLEWVI 162
            |:..:|....:.:|....|....:|.::
 Frog   140 LNRVLETFAQTFLSHGVKKSISIMETIL 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slmoNP_524705.1 PRELI 15..168 CDD:398400 32/152 (21%)
prelid2NP_001016922.1 PRELI 18..172 CDD:398400 32/150 (21%)

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