DRSC/TRiP Functional Genomics Resources

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Protein Alignment slmo and prel

DIOPT Version :10

Sequence 1:NP_524705.1 Gene:slmo / 44132 FlyBaseID:FBgn0029161 Length:215 Species:Drosophila melanogaster
Sequence 2:XP_563974.2 Gene:prel / 3291200 VectorBaseID:AGAMI1_004588 Length:216 Species:Anopheles gambiae


Alignment Length:211 Identity:62/211 - (29%)
Similarity:100/211 - (47%) Gaps:15/211 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYFPKWTHA 66
            |.:.||.::|:.||.|||..|.:||||.:..::..|.|.|.|.:|.||:.||:....:.|||...
Mosquito     3 KYYESETVYNYSWEQVTQGFWNRYPNPFSSHVLSEDTVSREVRNGKLHSKRLLTKTNHVPKWGER 67

  Fly    67 LIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEA----T 127
            .. .||:....|.|.|||..:.:|..|.|:.|.:.:||.|.:.|:..|....||:..:.|    :
Mosquito    68 FF-KAKSVNIVEESVVDPNERTLVTYTRNIGFNKIMSVVEKVVYKSLPDQPGKTIAIRSAWIDSS 131

  Fly   128 VTVFGVPLSHY-MEDLLTSTISTNAGKGRQGLEWVIGLI--NTEVKGIARGTDELLHNTRRSIDE 189
            |..||..:..: :|     ....|..|...|..:|:..:  |..| .:|...........:: .:
Mosquito   132 VYGFGTAIRAFGLE-----RFKKNCAKTVSGFNYVLQHMFPNNPV-ALAAAAAAAASQASKA-QK 189

  Fly   190 VTESARKSMDEISAQA 205
            :.|:|:.:.|.:.|||
Mosquito   190 LREAAKHASDHMKAQA 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slmoNP_524705.1 PRELI 15..168 CDD:398400 49/159 (31%)
prelXP_563974.2 PRELI 16..164 CDD:398400 48/153 (31%)

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