DRSC/TRiP Functional Genomics Resources

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Protein Alignment slmo and PRELID1

DIOPT Version :9

Sequence 1:NP_001097094.1 Gene:slmo / 44132 FlyBaseID:FBgn0029161 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_037369.1 Gene:PRELID1 / 27166 HGNCID:30255 Length:219 Species:Homo sapiens


Alignment Length:214 Identity:53/214 - (24%)
Similarity:103/214 - (48%) Gaps:12/214 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVV-DGVLHTHRLVQSKWYFPKWT 64
            :|.:..:.:....|:.|..|.|::||||.:..::..|:|.|.|. |..|.:.||:......|:|.
Human     2 VKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTNRMPRWA 66

  Fly    65 HALI--GTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEAT 127
            ..|.  ..|.:.:..|.|.|||:.:.|...|.|:...|.:.|:|...|..:..::..|.:::||.
Human    67 ERLFPANVAHSVYVLEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDNSGWTEIRREAW 131

  Fly   128 V--TVFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEVKGIARGTDELLHNTRRSIDEV 190
            |  ::|||  |..:::...:...:|..|..:|.|:::..:..|..     :..|:...:.:.::.
Human   132 VSSSLFGV--SRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEAP-----SKTLVETAKEAKEKA 189

  Fly   191 TESARKSMDEISAQAAKAA 209
            .|:|..:.::....|:|||
Human   190 KETALAATEKAKDLASKAA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slmoNP_001097094.1 PRELI 15..168 CDD:398400 43/157 (27%)
PRELID1NP_037369.1 PRELI 16..172 CDD:309720 43/157 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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