DRSC/TRiP Functional Genomics Resources

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Protein Alignment slmo and ups2

DIOPT Version :10

Sequence 1:NP_524705.1 Gene:slmo / 44132 FlyBaseID:FBgn0029161 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_595338.1 Gene:ups2 / 2540922 PomBaseID:SPBC36.10 Length:184 Species:Schizosaccharomyces pombe


Alignment Length:172 Identity:64/172 - (37%)
Similarity:96/172 - (55%) Gaps:4/172 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVD-GVLHTHRLVQSKWYFPKWT 64
            |||:.|.|:|.:|:|.|:.|.|:||||.....:|..|.::|:|:| |||:|.||:......|:|.
pombe     1 MKIFESCHLFQYPFEQVSAAHWQKYPNEHATHVIAVDTLDRKVLDNGVLYTERLITCHQALPRWI 65

  Fly    65 HALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEATVT 129
            ..||..|:.|:..|.|.||.:.:.:.|.|:||||...:.|||.:.|.||| :...|:.:|||.:.
pombe    66 LKLIDGAQDCYIRETSYVDLKARTLTLLTSNLTFSDRLRVDETVTYSPHP-ELEATVFQQEARIE 129

  Fly   130 VFGV--PLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEV 169
            ....  .||:.:|..........|.:|::|.|.|:..||..|
pombe   130 ALACMKRLSNLIEQWSVDGFGKKASRGKEGFESVLEKINMSV 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slmoNP_524705.1 PRELI 15..168 CDD:398400 56/155 (36%)
ups2NP_595338.1 PRELI 15..170 CDD:398400 56/155 (36%)

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