DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mkrn1 and MKRN3

DIOPT Version :9

Sequence 1:NP_001246867.1 Gene:Mkrn1 / 44131 FlyBaseID:FBgn0029152 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_005655.1 Gene:MKRN3 / 7681 HGNCID:7114 Length:507 Species:Homo sapiens


Alignment Length:352 Identity:136/352 - (38%)
Similarity:180/352 - (51%) Gaps:68/352 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QTICRYYVRGICRFGELCRFSHDLSRGRPECEE------------------------QVATDVLP 60
            |.|||||:.|.|:.||.||:||||| ||....|                        |...:..|
Human    98 QIICRYYIHGQCKEGENCRYSHDLS-GRKMATEGGVSPPGASAGGGPSTAAHIEPPTQEVAEAPP 161

  Fly    61 KPSTSSSSTIGS---------------RSASISSQQRNWANAPVFVPSQK---RYTAHEQSEFET 107
            ..|:.|...|||               |.|:..:...:||:|..|||.|.   |:.|..      
Human   162 AASSLSLPVIGSAAERGFFEAERDNADRGAAGGAGVESWADAIEFVPGQPYRGRWVASA------ 220

  Fly   108 TVDPEAVME-AQAGASYDTLAPGVSWAEVVGGPSSLNKEDYGEENSSCAWGEFSAYPIHMELCEM 171
               |||.:: ::.......:..|:.:.             |......|..||...| :|.::|:|
Human   221 ---PEAPLQSSETERKQMAVGSGLRFC-------------YYASRGVCFRGESCMY-LHGDICDM 268

  Fly   172 CDQYCLHPTDQVQRRSHNRECLQQHEQAMELSFAIARSKDKTCGICFDTIMEKAG-REKRFGILP 235
            |....|||.|..||..|.|.|::.||:.||||||:.|..||.||||.:.:.|||. .::|||||.
Human   269 CGLQTLHPMDAAQREEHMRACIEAHEKDMELSFAVQRGMDKVCGICMEVVYEKANPNDRRFGILS 333

  Fly   236 NCNHIFCLECIRTWRQAKQFENKITRACPECRVCSDFVCPSAFWMETKEEKDKLLNDYRAALGAK 300
            ||||.||:.|||.||.|:||||:|.::||:|||.|:.|.||.||:|.:|||.||:..|:.|:..|
Human   334 NCNHSFCIRCIRRWRSARQFENRIVKSCPQCRVTSELVIPSEFWVEEEEEKQKLIQQYKEAMSNK 398

  Fly   301 DCKYFKKGEGKCPFGNKCFYKHALPNG 327
            .|:||.:|.|.||||:.|||||..|.|
Human   399 ACRYFAEGRGNCPFGDTCFYKHEYPEG 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mkrn1NP_001246867.1 ZnF_C3H1 20..43 CDD:214632 14/22 (64%)
RING 213..267 CDD:238093 31/54 (57%)
MKRN3NP_005655.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
DNA_pol3_gamma3 <33..232 CDD:331207 41/143 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..89
ZnF_C3H1 95..121 CDD:214632 14/22 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..149 1/22 (5%)
PHA02929 <252..400 CDD:331986 77/148 (52%)
Makorin-type Cys-His 266..293 12/26 (46%)
RING-HC_MKRN1_3 308..368 CDD:319644 36/59 (61%)
RING-HC finger (C3HC4-type) 311..364 CDD:319644 31/52 (60%)
MKRN1_C 439..505 CDD:318109
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 85 0.172 Domainoid score I8156
eggNOG 1 0.900 - - E1_KOG1039
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 252 1.000 Inparanoid score I3221
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58455
OrthoDB 1 1.010 - - D1388677at2759
OrthoFinder 1 1.000 - - FOG0000752
OrthoInspector 1 1.000 - - mtm8603
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11224
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X837
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.940

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