DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mkrn1 and mkrn2

DIOPT Version :9

Sequence 1:NP_001246867.1 Gene:Mkrn1 / 44131 FlyBaseID:FBgn0029152 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_694511.1 Gene:mkrn2 / 170783 ZFINID:ZDB-GENE-020213-2 Length:414 Species:Danio rerio


Alignment Length:415 Identity:132/415 - (31%)
Similarity:210/415 - (50%) Gaps:75/415 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LGRSQTICRYYVRGICRFGELCRFSHDLSRGRPE--CE----------EQVATDVLPKPSTSSSS 68
            :...|..|||::.|:||.|..|.|||||:..:|.  |:          ::...|.:..|...|.:
Zfish     1 MSTKQVTCRYFLHGVCREGSRCLFSHDLTTSKPSTICKYYQRGACAYGDRCRYDHIKPPGRGSGA 65

  Fly    69 TIGSRSASISSQQRNWANAPVFVP----------------------SQKRYTAHEQSE----FET 107
            .....:.|.||.   .|:||...|                      |:.|..:.|.||    :|.
Zfish    66 PADHSNRSSSSA---GASAPGPGPPANTSKHLKKPLVLRDKALCSDSRPRVFSAESSELSECWEQ 127

  Fly   108 TVD----PEAVMEA-QAG--ASYDTLAPGVSWAEVVGGPSSLNKEDYGEENS----------SCA 155
            ..|    |.:.:|| ::|  ||....|...::.|:             ::.|          .|.
Zfish   128 RDDGAQKPHSYLEAIRSGLDASAAAAATAGTFPEL-------------QQTSPQICPFLAAGQCQ 179

  Fly   156 WGEFSAYPIHMELCEMCDQYCLHPTDQVQRRSHNRECLQQHEQAMELSFAIARSKDKTCGICFDT 220
            :||...| :|.|:||:|.|:.|||.|..||.:|.::|:...|..||.:||:.:|:||.|.||.|.
Zfish   180 YGESCPY-LHGEMCEICRQHVLHPHDPEQRAAHEKKCMVAFEMDMERAFAVQQSQDKVCKICLDV 243

  Fly   221 IMEKAG-REKRFGILPNCNHIFCLECIRTWRQAKQFENKITRACPECRVCSDFVCPSAFWMETKE 284
            :.||:. .|:|||||.:|.|.:||.|||.||..:|..|:|.::||||||.|:||.||.:|:|.:|
Zfish   244 VYEKSSPSERRFGILSSCAHTYCLNCIRQWRCVEQLHNQIRKSCPECRVVSEFVIPSIYWVEDQE 308

  Fly   285 EKDKLLNDYRAALGAKDCKYFKKGEGKCPFGNKCFYKHALPNGDIVDVGLPKRTRKLQSQNEIID 349
            :|:.|:.::::.:..|.||||.:|.|.||||.||||.||..:|...:...|:  ::|.::..:..
Zfish   309 QKNLLIEEFKSGVSKKACKYFDQGRGTCPFGGKCFYMHAYADGRRAEPDKPR--KQLSAEGNVRF 371

  Fly   350 LLDIYLWDYVDRRDYHWLEMISSDI 374
            ...:.|||:::.|::..:..:..::
Zfish   372 QNSVRLWDFIEEREHRSVPQLEDEV 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mkrn1NP_001246867.1 ZnF_C3H1 20..43 CDD:214632 12/22 (55%)
RING 213..267 CDD:238093 27/54 (50%)
mkrn2NP_694511.1 ZnF_C3H1 2..28 CDD:214632 12/25 (48%)
ZnF_C3H1 35..57 CDD:214632 2/21 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..94 9/39 (23%)
PHA03096 <178..326 CDD:222981 67/148 (45%)
Makorin-type Cys-His 192..221 12/28 (43%)
RING 237..291 CDD:238093 27/53 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 91 1.000 Domainoid score I7675
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 253 1.000 Inparanoid score I3175
OMA 1 1.010 - - QHG58455
OrthoDB 1 1.010 - - D1388677at2759
OrthoFinder 1 1.000 - - FOG0000752
OrthoInspector 1 1.000 - - mtm6616
orthoMCL 1 0.900 - - OOG6_103641
Panther 1 1.100 - - O PTHR11224
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X837
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.940

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