DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbs and nectin3b

DIOPT Version :10

Sequence 1:NP_788355.1 Gene:hbs / 44129 FlyBaseID:FBgn0287864 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_001014326.1 Gene:nectin3b / 541491 ZFINID:ZDB-GENE-050327-14 Length:574 Species:Danio rerio


Alignment Length:706 Identity:158/706 - (22%)
Similarity:232/706 - (32%) Gaps:216/706 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   590 LANRPGLWGGSVSTLEMYVNITQDLDGIVYTCQ-----SHNEVLQRSVHETISLDILYPPKFETP 649
            |.|.|...|.:|..|.|...::    |:||..|     ..|.||.::|  |:|..:.........
Zfish    10 LRNNPIQLGLNVRVLLMLSFVS----GLVYGSQVIVPPKVNAVLGKNV--TLSCRVQVDTNLSLT 68

  Fly   650 QSTTFVGVEGAPFHVELLASGNPMVITYTWTKDGLPI-----------SSNSLSGQRLISDGPRL 703
            ||:   .....|.....||..|||.        |:.|           |.::|....::.|    
Zfish    69 QSS---WERKLPNGWVTLAVYNPMF--------GISIPPDYERRLSFRSPSALDATIMLED---- 118

  Fly   704 NISRLSRNDAGVYICEAL-----NSQGTALLEIQVAVEYAPTITAVSEGRSFVAGEPAVLACHIQ 763
                :...|.|||.|:..     |:|  |...:.|.||....::|.|........|..|..|..:
Zfish   119 ----VGFADIGVYTCKVATFPLGNTQ--ASTTVSVLVEPKVYVSAGSSALIDGGNETTVATCIAE 177

  Fly   764 -ARPLEAAHVRWSRDGYDLATRTISSFENGTALLQIASV---ERSDIGN-FTCIVDNQRGAPAAQ 823
             |||  .|.|.|..:.|.::...:....|||...|:..:   .|...|: .||:|.:    ||.|
Zfish   178 RARP--PADVSWETNLYGMSEAHMQEDANGTTTTQVHYIWQPSRHAQGHTLTCVVKH----PALQ 236

  Fly   824 N-----VLLVVQTAPEI-------DHSPGFTRYAARLGVRAQLICRSLASPQPS-FIWRRHGKDL 875
            :     .::.||.||:|       |.      |..|..|  ||.||:.|:|... |.|.|...::
Zfish   237 SDFRIPYIINVQFAPDILVLGYDGDW------YVGRENV--QLKCRAKANPPAQHFRWIRLDGEM 293

  Fly   876 KMQRRNKFKSVERQVDALNFESALLIENTSPDDYGQYECVVRNSLGQASTTLEF---SKPSR--- 934
            .       ...||..:.|.|...|     ..:|.|.|.|.|.|.:|..|..:..   ..||.   
Zfish   294 P-------NGAERVNNTLVFTRPL-----QKNDSGVYRCEVANDIGLHSRDIRIRIQDPPSTTTM 346

  Fly   935 -PDAPLQLRVGNVSDTGVDLNWTPGFDGGMQTYFRLRLKQHGEDKYKYVDAKPGHQNISLDGLKP 998
             |..|::|...::|.|      .||                  :|.:.:...|     :|..|..
Zfish   347 PPTTPVRLLTADISAT------APG------------------NKQRALITSP-----TLAPLHE 382

  Fly   999 GATYYFSVMAANEAGGSKFMPDIKLTLSKGSQPHSAEYTEKDELPNVMIIGITSAAMVLLVLNAA 1063
            |:   ...:.....||:.|:                                    ::||:|   
Zfish   383 GS---LGTIVGGAVGGALFL------------------------------------LLLLIL--- 405

  Fly  1064 LVAWFVIRRQNKSQSEAEPSNDDVYSKD--DSQSVYKLPITALQADVQKKAAASTYLVENVDIIQ 1126
              |....:||.::      ...|.|:|.  ....:.|.|.......|..|.:..|.|..|.|  .
Zfish   406 --AGVYYQRQRRT------FRGDYYTKQYHGPSDMQKAPQPHELQQVYSKGSPDTKLKSNQD--N 460

  Fly  1127 STAYPPKYQESSMCTPPYPLCNPDFTR-TLPNPK-----------RHSQRNSATGMIE----GMQ 1175
            .|.||.|.:|..          .||.| ..||.:           .|:.:|...|...    |..
Zfish   461 GTIYPDKDREEW----------GDFDRERSPNGRSRALREAGQLNHHNHQNHEHGFHSNHHTGHP 515

  Fly  1176 MRSKDDHMLISNGLYIPSPS--PASSLVIKGS-YISSPSPAPPADGSYFNMSDKYM 1228
            ......|.:..:.|. |.|.  ||..::..|| |:    |....|..|.:.:|..|
Zfish   516 HSYSPAHHIQRSSLQ-PQPRRYPAPQVMSNGSPYL----PEDCYDNEYVSHTDGSM 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_788355.1 IG_like 45..137 CDD:214653
Ig strand B 56..60 CDD:409353
Ig strand C 68..72 CDD:409353
Ig strand E 91..105 CDD:409353
Ig strand F 115..120 CDD:409353
Ig strand G 128..131 CDD:409353
Ig 162..232 CDD:472250
Ig strand B 162..167 CDD:409353
Ig strand C 177..181 CDD:409353
Ig strand E 207..211 CDD:409353
Ig strand F 221..226 CDD:409353
Ig 246..342 CDD:472250
Ig strand B 269..273 CDD:409353
Ig strand C 283..287 CDD:409353
Ig strand F 320..325 CDD:409353
Ig strand G 335..338 CDD:409353
Ig 343..431 CDD:472250
Ig strand B 363..367 CDD:409353
Ig strand C 377..381 CDD:409353
Ig strand E 406..410 CDD:409353
Ig strand F 420..425 CDD:409353
Ig 443..527 CDD:472250
Ig strand B 466..470 CDD:409353
Ig strand C 480..484 CDD:409353
Ig strand E 503..507 CDD:409353
Ig strand F 517..522 CDD:409353
Ig 554..640 CDD:472250 17/54 (31%)
Ig strand B 561..565 CDD:409353
Ig strand C 575..579 CDD:409353
Ig strand E 602..608 CDD:409353 2/5 (40%)
Ig strand F 618..623 CDD:409353 3/9 (33%)
Ig strand G 633..636 CDD:409353 0/2 (0%)
Ig_3 643..722 CDD:464046 18/94 (19%)
Ig 748..829 CDD:472250 22/90 (24%)
Ig strand B 756..760 CDD:409353 1/3 (33%)
Ig strand C 769..775 CDD:409353 2/5 (40%)
Ig strand E 792..798 CDD:409353 2/5 (40%)
Ig strand F 808..813 CDD:409353 2/5 (40%)
Ig strand G 822..825 CDD:409353 1/7 (14%)
Ig_3 833..918 CDD:464046 25/92 (27%)
FN3 <932..1151 CDD:442628 39/224 (17%)
FN3 935..1017 CDD:238020 14/81 (17%)
nectin3bNP_001014326.1 Ig 37..148 CDD:472250 28/133 (21%)
Ig strand B 53..57 CDD:409470 2/5 (40%)
Ig strand C 69..73 CDD:409470 2/6 (33%)
Ig strand E 112..116 CDD:409470 0/3 (0%)
Ig strand F 126..131 CDD:409470 3/4 (75%)
Ig strand G 140..143 CDD:409470 2/4 (50%)
IgC1_2_Nectin-3-4_like 151..247 CDD:409501 24/101 (24%)
Ig strand A 151..157 CDD:409501 0/5 (0%)
Ig strand B 170..177 CDD:409501 2/6 (33%)
Ig strand C 182..188 CDD:409501 2/5 (40%)
Ig strand C' 190..192 CDD:409501 0/1 (0%)
Ig strand D 194..201 CDD:409501 0/6 (0%)
Ig strand E 207..215 CDD:409501 1/7 (14%)
Ig strand F 225..232 CDD:409501 3/6 (50%)
Ig strand G 238..244 CDD:409501 0/5 (0%)
IG_like 267..337 CDD:214653 23/83 (28%)
Ig strand B 269..273 CDD:409353 3/5 (60%)
Ig strand C 282..287 CDD:409353 1/4 (25%)
Ig strand E 302..306 CDD:409353 1/3 (33%)
Ig strand F 317..322 CDD:409353 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 442..484 16/53 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 498..549 11/51 (22%)
Blue background indicates that the domain is not in the aligned region.

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