DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbs and side-III

DIOPT Version :10

Sequence 1:NP_788355.1 Gene:hbs / 44129 FlyBaseID:FBgn0287864 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_001036681.1 Gene:side-III / 4379844 FlyBaseID:FBgn0083949 Length:1689 Species:Drosophila melanogaster


Alignment Length:1018 Identity:193/1018 - (18%)
Similarity:349/1018 - (34%) Gaps:301/1018 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 ATTPLRAELNLTV-----------LYAPKDVYLSG--------------ANQAKVGDSVQLSCVT 369
            :|.||....|..:           |:|......||              |.:|.:|.:..|.|..
  Fly     9 STMPLTTSYNANIRRSCLALFALFLFAAHISLTSGQIDWDDDDDPVSTVAVEAVLGRTASLPCDI 73

  Fly   370 APSNPQARI---------------SWSINGRPLDNSTYKTTSSSDG-----------GWVSSSNI 408
            .|.....|:               |:.:.|||.:.:.|.:.::|.|           ..:|..||
  Fly    74 EPEAKDDRVYMVLWFRESAGKPLYSFDVRGRPFEKALYWSDTNSFGPRAYFVTGQQPAKLSVDNI 138

  Fly   409 SLTIDSQSRTFIAVCHALNTELTQNVVGSHTVN--VLYPPSPPLLTGYNDGDI------LISGSI 465
            .|..:...|     |   ..:...:...:|.:|  |:.||...|:...:..|:      |:.|..
  Fly   139 QLDDEGVYR-----C---RVDFQNSPTRNHRINLTVIVPPHQILVYDASGRDVAGAVGPLLEGDN 195

  Fly   466 LKLQCSSAGGNPPPTLQWYKNDKIINAPSKLVDSKITS----ELSLLVNASDNNAIYKCKVQNAA 526
            :.|.|...||.|.||:.|....:.:.|.|.:...:..:    |::.:..::.||. |:|:..|..
  Fly   196 IVLTCEVRGGRPEPTVTWMNGTRTLEAGSGVSMGRHVTVNRLEVAQISRSALNNT-YRCQASNTK 259

  Fly   527 IDIPLFATKTLGVHFPPETVKISVVPKNLVPGIRAKLICDSSSSNPPAKISWWKDGIPVE-GLNL 590
            :..|:..:..:.:...|.:|.::...|......:..|.|..:.|.|..:|.|.::..|.: ||..
  Fly   260 LVAPVERSIRIEMLLKPTSVNLTNKLKVFASNTQYNLTCIVAGSVPDTEIKWTQNNRPFKRGLLS 324

  Fly   591 ANRPGLWGGSVSTLEMYVNITQDLDGIVYTCQSHNEVLQRS-VHETISLDILYPPKFETPQSTTF 654
            .::..  |..:|||..|.. .:| ||.:..|:..|..||.| :.:::.::::||     ||.|..
  Fly   325 TSQSN--GRVISTLTFYPQ-PED-DGTMLKCEGSNPRLQNSAIEDSLMMNVIYP-----PQVTLS 380

  Fly   655 VG--------VEGAPFHVELLASGNPMVITYTWTKDGLPISSNSLSGQRLISDGPRLNISRLSRN 711
            :|        .||...:.|.....||......|:.||.|::.|...|  :|.....|.:.|:.|.
  Fly   381 LGSTLRPDDIKEGDDVYFECHIKSNPKEHRIMWSHDGQPVTQNVSWG--IIISTRSLVLQRVGRI 443

  Fly   712 DAGVYICEALNSQG-TALLEIQVAVEYAP-----TITAVSEGRSFVAGEPAVLACHIQARPLEAA 770
            .:|.|.|.|.|.:| |....:.:.:.|||     :||.:  |.|.....|  :.|.:.:.|.| .
  Fly   444 HSGFYACSAANDRGETQSAPVNLRIRYAPVCSSSSITVI--GASLEEDVP--IPCRVNSDPPE-I 503

  Fly   771 HVRW----SRDGYDLATRTISSFENGTALLQIASVERSDIGNFTCIVDNQRGAPAAQNVLLVVQT 831
            ...|    |.:.:::.:...::.::.| :...:.|.|      |.:..|:....:      .|:|
  Fly   504 DFEWTFSTSGEHFEVPSGHYATIQDPT-MTTTSDVRR------TVVESNETHFES------YVET 555

  Fly   832 APEIDHSPGFTRYAARLGVRAQLICRSLASPQPSFIWRRHGKDLKMQRRNKFKSVERQVDALNFE 896
            ..|:.::|                                    |.:|                 
  Fly   556 VSELIYTP------------------------------------KGER----------------- 567

  Fly   897 SALLIENTSPDDYGQYECVVRNSLGQASTTLEF-----SKPS-------RPDAPLQLRVGNVSDT 949
                       |||...|..||::|:.|....|     :||.       ||.......:.:.:.|
  Fly   568 -----------DYGTLACYGRNAIGKQSDPCVFQVVPAAKPGALRNCTLRPYVVTSASLNSSNQT 621

  Fly   950 GVDLNWTPGFDGGMQTYFRLRLKQHG--EDKYKYVD-AKPGHQNISLDGLKPGATYYFSVMAANE 1011
            .:..|             ::...|:|  |..|.::: .:..|                     |.
  Fly   622 TMHAN-------------QILPTQYGRHESNYPHMEYVRERH---------------------NS 652

  Fly  1012 AGGSKFMPDIKLTLSKGSQPHSAEYTEKDELPNVMIIGITSAAMVLLVLNAALVAWFVIRRQNKS 1076
            :||:          :.|:.|.:.    ::.:.|..:.|.|||...              :..||.
  Fly   653 SGGN----------NNGTAPAAG----RNNVANKNMRGRTSAGQA--------------KSNNKQ 689

  Fly  1077 QSEAEPSNDDVYSKDDSQSVYKLPITALQADVQKKAAASTYLVENVDIIQSTA-----------Y 1130
            .::.:...    .|..:.......:.|::...|:|..:...........|:||           .
  Fly   690 LTQQQLQR----LKKRTSFTPSQTLAAIERQRQRKQLSQQQQQLQQQHHQATATKSGGDNKPDGS 750

  Fly  1131 PPKYQESSMCTPPYPLCNPDFTRTLPNP-----KRHSQR-----NSATGMIEGMQMRSKDDHMLI 1185
            |.|..:..|            .|...:|     ::|.|:     ::||.:....:.:::.:  |.
  Fly   751 PAKSSKQRM------------RRASRDPQIQQQQQHQQQQQHQLHAATSITSSQRKQAESN--LS 801

  Fly  1186 SNGLYIPSPSPASSLVIKGSYISSPSPAPPADGSYFNMSDKYM 1228
            ::.|...|.|.:.|.....|.|:|.|........|||...|.|
  Fly   802 TSHLGKGSSSSSRSRRSSSSNINSKSNNGKQPAKYFNKRQKNM 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_788355.1 IG_like 45..137 CDD:214653
Ig strand B 56..60 CDD:409353
Ig strand C 68..72 CDD:409353
Ig strand E 91..105 CDD:409353
Ig strand F 115..120 CDD:409353
Ig strand G 128..131 CDD:409353
Ig 162..232 CDD:472250
Ig strand B 162..167 CDD:409353
Ig strand C 177..181 CDD:409353
Ig strand E 207..211 CDD:409353
Ig strand F 221..226 CDD:409353
Ig 246..342 CDD:472250 4/11 (36%)
Ig strand B 269..273 CDD:409353
Ig strand C 283..287 CDD:409353
Ig strand F 320..325 CDD:409353
Ig strand G 335..338 CDD:409353 0/2 (0%)
Ig 343..431 CDD:472250 24/127 (19%)
Ig strand B 363..367 CDD:409353 1/3 (33%)
Ig strand C 377..381 CDD:409353 2/18 (11%)
Ig strand E 406..410 CDD:409353 2/3 (67%)
Ig strand F 420..425 CDD:409353 1/4 (25%)
Ig 443..527 CDD:472250 22/93 (24%)
Ig strand B 466..470 CDD:409353 1/3 (33%)
Ig strand C 480..484 CDD:409353 1/3 (33%)
Ig strand E 503..507 CDD:409353 1/7 (14%)
Ig strand F 517..522 CDD:409353 2/4 (50%)
Ig 554..640 CDD:472250 22/87 (25%)
Ig strand B 561..565 CDD:409353 1/3 (33%)
Ig strand C 575..579 CDD:409353 1/3 (33%)
Ig strand E 602..608 CDD:409353 3/5 (60%)
Ig strand F 618..623 CDD:409353 1/4 (25%)
Ig strand G 633..636 CDD:409353 0/2 (0%)
Ig_3 643..722 CDD:464046 24/86 (28%)
Ig 748..829 CDD:472250 12/84 (14%)
Ig strand B 756..760 CDD:409353 0/3 (0%)
Ig strand C 769..775 CDD:409353 1/9 (11%)
Ig strand E 792..798 CDD:409353 1/5 (20%)
Ig strand F 808..813 CDD:409353 1/4 (25%)
Ig strand G 822..825 CDD:409353 0/2 (0%)
Ig_3 833..918 CDD:464046 8/84 (10%)
FN3 <932..1151 CDD:442628 32/239 (13%)
FN3 935..1017 CDD:238020 11/84 (13%)
side-IIINP_001036681.1 V-set 59..166 CDD:462230 21/114 (18%)
Ig_3 190..257 CDD:464046 17/67 (25%)
Ig 289..359 CDD:472250 19/73 (26%)
Ig strand C 308..312 CDD:409468 1/3 (33%)
Ig strand E 335..338 CDD:409468 2/2 (100%)
Ig strand F 348..353 CDD:409468 1/4 (25%)
Ig_3 374..454 CDD:464046 24/86 (28%)
Blue background indicates that the domain is not in the aligned region.

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