DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbs and plum

DIOPT Version :9

Sequence 1:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_001163744.1 Gene:plum / 43197 FlyBaseID:FBgn0039431 Length:1298 Species:Drosophila melanogaster


Alignment Length:598 Identity:130/598 - (21%)
Similarity:196/598 - (32%) Gaps:223/598 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   403 VSSSNISLTIDSQSRTF-IAVCHALNTELTQNV--VGSHTVNVL---------YPPSPPLLTGYN 455
            ::..|..||:..:|.|. .||....|:...|..  :..|.|..|         |.|..|:||.||
  Fly    22 LTDHNGRLTLTKESTTVAAAVAQPKNSTALQPYLQIQKHAVTRLTISKPHSPYYLPCIPILTPYN 86

  Fly   456 -DGDILISGSILKLQCSSAGGNPPPTLQWYKNDKIINAPSK------LVDSKITSELSLLVNASD 513
             |.|                 |.|....||:||.::...|.      :.|:   ..|.|..|...
  Fly    87 HDQD-----------------NQPIYCSWYRNDVVVEQVSYRKNDFFIYDN---GTLRLPTNEKA 131

  Fly   514 NNAIYKCKV---QNAAIDIPLFATKTLGVHFPPETVKISVVPKNLVPGIRAKLICDSSSSNPPAK 575
            :...| ||:   ::|.|      :..:.|.:|        |.|.|.||           ....|.
  Fly   132 SGEYY-CKIEWDESAVI------SDRITVEYP--------VLKRLFPG-----------QQQAAN 170

  Fly   576 ISWWKDGIPVEGLNLANRPGLWGGSVSTLEMYVNITQDLDGIVYTCQSHNEVLQRSVHETISLDI 640
            ||           .|.|:|                      :|.:|                   
  Fly   171 IS-----------ALENKP----------------------LVLSC------------------- 183

  Fly   641 LYPPKFETPQSTTFVGVEGAPFHVELLASGNPMVITYTWTKDGLPISSNSLSGQRLISDGPRLNI 705
                        .|:.|..|.|             ::.:..|.|...:::|    ::::| .|.:
  Fly   184 ------------PFLSVPAARF-------------SWYFGNDSLTNDNSAL----ILTNG-TLIL 218

  Fly   706 SRLSRNDAGVYICEALNSQGTA-----LLEIQVAVEYAP---------TITAVSEGR-------- 748
            ..|....||.|.|.|.|:..:.     :.::||..:.|.         |.|||||.:        
  Fly   219 RHLRLEQAGKYKCVAQNTFASKTHRQFIWQLQVEPKDATFYPKNEAGITETAVSEAQLLPAFQNA 283

  Fly   749 -SFV-AGEPAVLACHIQA---------RPLEAAHVRWSRD--GYDLATRTISSFENGTALLQIAS 800
             .|| ||...:|.||..|         :|.....||.|.:  .|.:...:|:..|          
  Fly   284 TVFVPAGGSVLLQCHAVADFVPIVWYLQPPNNKMVRLSNNSVAYSITNASIARHE---------- 338

  Fly   801 VERSDIGNFTCIVDNQRGAPAAQNVLLVVQTAPEI-DHSPGFTRYAARLGVRAQLICRSLASPQP 864
                  |.::||...:     .||..::|.|.|.| ...|....|   :|:...|.||:...|:|
  Fly   339 ------GRYSCITPLE-----TQNFQVIVTTPPRIVSRLPVEVVY---IGLSRTLTCRAEGHPEP 389

  Fly   865 SFIWRRHGKDLKMQRRNKFKSVERQVDALNFESALLIENTSPDDYGQYECVVRNSLGQASTT--L 927
            |..|..:|..|.       .|..|.:..    :.|.:.:....:.|.|:||.||..|:.|.|  |
  Fly   390 SITWYHNGVHLN-------SSYTRYISG----NELHVHSFDSKEEGIYQCVARNVAGEDSATGEL 443

  Fly   928 EFSKPSRPDAPLQ 940
            .|::......|||
  Fly   444 RFNRQLEEVNPLQ 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_001286439.1 Ig 44..122 CDD:299845
IG_like 45..137 CDD:214653
Ig 153..231 CDD:299845
IG_like 258..342 CDD:214653
Ig 266..327 CDD:299845
IG_like 357..>414 CDD:214653 3/10 (30%)
Ig 360..427 CDD:299845 7/24 (29%)
Ig <468..526 CDD:299845 14/66 (21%)
I-set 547..633 CDD:254352 13/85 (15%)
Ig 556..631 CDD:299845 10/74 (14%)
I-set 644..735 CDD:254352 18/95 (19%)
IGc2 668..725 CDD:197706 12/56 (21%)
IG_like 751..829 CDD:214653 19/89 (21%)
IGc2 753..815 CDD:197706 15/72 (21%)
Ig 852..928 CDD:143165 21/77 (27%)
FN3 935..1017 CDD:238020 3/6 (50%)
plumNP_001163744.1 IG_like 170..241 CDD:214653 23/152 (15%)
IGc2 175..235 CDD:197706 19/130 (15%)
IG_like 284..356 CDD:214653 20/92 (22%)
I-set 360..443 CDD:254352 26/96 (27%)
IGc2 378..435 CDD:197706 18/67 (27%)
FN3 804..886 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11640
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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