DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hbs and side-IV

DIOPT Version :9

Sequence 1:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster


Alignment Length:861 Identity:187/861 - (21%)
Similarity:287/861 - (33%) Gaps:229/861 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 NGANLVCEA--------KNLLATTPLRAELNLTVLYAPKDVYLSGANQAKVGDSVQLSCVTAPSN 373
            :|.:.||..        :||....||     .||             |..:|....|.|   ..:
  Fly    53 SGISQVCSTYVEQDELMQNLDRPVPL-----TTV-------------QGVLGRQAMLPC---DIS 96

  Fly   374 PQAR------ISW--SINGRPLDNSTYKTTSSSDGG-WVSSSNISLTIDSQSRTFIAVCHALNTE 429
            ||.|      :.|  ..:|.|:.|...:........ |.|.:.........|.|..|.....|..
  Fly    97 PQERDDAVYMVLWFREGDGEPIYNFDVRGRQFGQARLWSSPTAFGTRAHFSSTTHPAQLKIDNIR 161

  Fly   430 LTQNVV--------GSHTVN------VLYPPSPPLLTGYN----DGDI--LISGSILKLQCSSAG 474
            :....|        .|.|.|      |:.||..|::.|.|    .|::  ...|:.:.|.|..:|
  Fly   162 IEDEGVYRCRVDFRNSPTRNLKINLTVIVPPDRPVIYGQNRHEKAGNVESFSEGNDIVLSCEVSG 226

  Fly   475 GNPPPTLQWY-KNDKIINAPSKLVDSKITSELSL-LVNASDNNAIYKCKVQNAAIDIPLFATKTL 537
            |.|.|.:.|| .|..|..:..:..|.|..:.||. .|.....|:...|...|..:..|......|
  Fly   227 GRPRPNVTWYLDNTAIDESFEQRPDGKTINHLSYPNVGRQHLNSRLMCVASNTNLTPPNNRVVIL 291

  Fly   538 GVHFPPETVKISVVPKNLVPGIRAKLICDSSSSNPPAKISWWKDGIPVEGLNL-ANRPGLWGGSV 601
            .|:..|..|.|....:.:.......:.|.||.|.|||.|:|||....::.|.. .|.|.....|:
  Fly   292 DVNLKPIAVHILTKDRFVSADRTYDVECKSSGSKPPALITWWKGSKQLKKLTKNFNEPDNQSLSI 356

  Fly   602 STLEMYVNITQDLDGIVYTCQSHNEVLQRS-VHETISLDILYPPKFETPQSTTFVG--------V 657
            .|   :....:| ||...||::.|:.:..| :.:...|.:.|     .|.:|..:|        .
  Fly   357 LT---FTPGRED-DGKYLTCRAENQFIDGSAIEDKWRLIVHY-----QPTTTLKIGSSLNPDDIK 412

  Fly   658 EGAPFHVELLASGNPMVITYTWTKDGLPISSNSLSGQRLISDGPRLNISRLSRNDAGVYICEALN 722
            ||...:.|.:...||.....:|..:|..:..| :|...::|| ..|.:..:||..||.|.|.|:|
  Fly   413 EGDDAYFECIVLANPKPYKMSWFHNGKELQHN-ISAGVILSD-QSLVLQSVSRASAGDYTCLAVN 475

  Fly   723 SQGTALLE-IQVAVEYAPTITAVSEGRSFVAGEPAVLACHIQARPLEAAHVRWSRDGYDLATRTI 786
            |:|..... :.:.:.|||                                               
  Fly   476 SEGKGPSNPVTLRIRYAP----------------------------------------------- 493

  Fly   787 SSFENGTALLQIASVERSDIGNFTCIVDNQRGAPAAQNVLLVVQTAP---EIDHSPGFTRYAARL 848
                                   .|..|::....|.::     :|.|   |:|.||         
  Fly   494 -----------------------ICATDHEELLGALKH-----ETLPLKCEVDSSP--------- 521

  Fly   849 GVRAQLICRSLASPQPSFIWRRHGKDLKMQRRNKFKSVERQVDALNFESALLIENTSPD-DYGQY 912
                         |..||.|..:....:.:...:..|.|..:..||:       ..|.| |||..
  Fly   522 -------------PADSFQWTFNSSGEQTELPARLHSSETGMSRLNY-------TPSTDLDYGTI 566

  Fly   913 ECVVRNSLGQASTTLEFS--KPSRPDAPLQ-LRVGNVSDTGVDLNWTPGFDGGMQTYFRLRLKQH 974
            .|..:||:|...:...|.  ...|| .||| ..|.|.|...:.::...|||||:...|.|.|.: 
  Fly   567 SCWAKNSIGTQKSPCVFQIVAAGRP-FPLQNCSVTNQSVDSLQVDCLEGFDGGLPQGFMLELVE- 629

  Fly   975 GEDKYKYVDAKPGHQNIS---------LDGLKPGATYYFSVMAANEAGGSK--FMPDIKLTLSKG 1028
                   ::.....:||:         :|.|...|||...:.|.|..|.|:  .:.||..   ||
  Fly   630 -------LNTLRLARNITVSHTPVTFVIDNLDQAATYRMVIFAVNAKGRSEPTIIDDINF---KG 684

  Fly  1029 SQPHSAEYTEKDELPNVMIIGITSAAMVLLVLNAALVAWFVIRRQNKSQSEAEPSNDDVYSKDDS 1093
            ....:...|......:..:.|:|....:|..:...::| .:.||.:..:|            |.:
  Fly   685 VAKFTGASTGLSMPLSPFLAGLTLFCGLLFAIFCIMLA-AIYRRISNRRS------------DSN 736

  Fly  1094 QSVYKLPITALQADVQ 1109
            ..|.|.....:.||.|
  Fly   737 LKVAKHTQLTIPADCQ 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_001286439.1 Ig 44..122 CDD:299845
IG_like 45..137 CDD:214653
Ig 153..231 CDD:299845
IG_like 258..342 CDD:214653 7/32 (22%)
Ig 266..327 CDD:299845 3/17 (18%)
IG_like 357..>414 CDD:214653 12/65 (18%)
Ig 360..427 CDD:299845 15/75 (20%)
Ig <468..526 CDD:299845 18/59 (31%)
I-set 547..633 CDD:254352 24/87 (28%)
Ig 556..631 CDD:299845 22/75 (29%)
I-set 644..735 CDD:254352 25/99 (25%)
IGc2 668..725 CDD:197706 18/56 (32%)
IG_like 751..829 CDD:214653 3/77 (4%)
IGc2 753..815 CDD:197706 1/61 (2%)
Ig 852..928 CDD:143165 17/76 (22%)
FN3 935..1017 CDD:238020 26/93 (28%)
side-IVNP_001034052.2 V-set 79..188 CDD:284989 23/124 (19%)
IG_like 80..188 CDD:214653 23/123 (19%)
Ig 210..281 CDD:299845 19/70 (27%)
Ig 319..392 CDD:299845 24/76 (32%)
IG_like 319..383 CDD:214653 22/67 (33%)
IG_like 412..489 CDD:214653 22/78 (28%)
IGc2 413..478 CDD:197706 21/66 (32%)
Ig_3 509..572 CDD:290638 20/91 (22%)
fn3 593..675 CDD:278470 25/89 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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