DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hbs and side-V

DIOPT Version :9

Sequence 1:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_611765.2 Gene:side-V / 37679 FlyBaseID:FBgn0085400 Length:1174 Species:Drosophila melanogaster


Alignment Length:1080 Identity:196/1080 - (18%)
Similarity:363/1080 - (33%) Gaps:317/1080 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 VGDSVQLSCVTAP----------------SNPQARISWSINGRPL-------DNSTY-------- 392
            ||..|.|.|...|                .|.:...::...||||       |.|.:        
  Fly    48 VGSEVALPCDLVPGTGIVDKVQLVIWYRQGNVKPIYTFDARGRPLNLGIPWADESVFNKKAHFHH 112

  Fly   393 ---------KTTSSSDGGWVSSSNISLTIDSQSRTFIAVCHA-LNTELTQNVVGSHTVNVLYPPS 447
                     |...:||.|                  :..|.. .:...|:|  ....|.||.||:
  Fly   113 DTDPPALRIKNIQTSDAG------------------LYKCRVDFHKSPTRN--WRINVTVLVPPT 157

  Fly   448 PPLLTGYNDGDI-------LISGSILKLQCSSAGGNPPPTLQWYKNDKIINAPSK-LVDSKITSE 504
            ...:..::..:|       .:.|..:.|.|.|:||.|||.:.|::...:|:...: |.|..:.:.
  Fly   158 ALTILDHHGAEIRDQTAGPYLEGDSIDLTCLSSGGVPPPRVSWWREHALIDDSFQVLPDGSVRNV 222

  Fly   505 LSLL-VNASDNNAIYKCKVQNAAIDIPLFATKT-LGVHFPPETVKISVVPKNLVPGIRAKLICDS 567
            |.|. :...|...:|.|:..|..: :|....|. |.::.||.::.:..:...::.|.|:.:.|.:
  Fly   223 LRLKNIQRKDLLTMYTCQASNGHV-VPALTKKVILDMNLPPLSLLLQGLNHAVIAGTRSHVTCTA 286

  Fly   568 SSSNPPAKISWWKDGIPVEGLNLANRPGLWGGSVSTLEMYVNITQDLDGIVYTCQSHNE-VLQRS 631
            ..:.||.:|.|.|.|..|.|...:....  |.:..:..|.:.:.:|.:..|....|.|. :..:.
  Fly   287 IGARPPPEIIWSKAGQIVRGATSSTSSD--GNTTISELMLIPVPEDNERQVVCSISLNAGITSQQ 349

  Fly   632 VHE-------TIS-------------LDILYPPKFETPQSTTFVGVE-GAPFHVELLASG----- 670
            :||       |:.             |::.:.|         .|.:. |||...:.|..|     
  Fly   350 LHEGHTTVMTTLGNGHTGLYLKDSRVLNVTHAP---------IVNLNLGAPLDPDNLLKGTDVYL 405

  Fly   671 ------NPMVITYTWTKDGLPISSNS---LSGQRLISDGPRLNISRLSRNDAGVYICEALNSQGT 726
                  ||.:....|......:.|:.   :|.|.|:..|       :|::..|.|.|.|.|.||:
  Fly   406 ECDVKANPAITRVEWYHSDKQLHSSRGIIISNQTLVLQG-------ISKSSHGQYFCRASNLQGS 463

  Fly   727 -ALLEIQVAVEYAPTITAVSEGRSFVAGEPAVLACHIQARPLEAAHVRWSRDGYDLATRTISSFE 790
             :..|:.:.|:|.|...:.|........:...:.|.:.|.|::..:.:|..:....:...:....
  Fly   464 VSSNEVYLDVKYPPVCKSESTIIRAALKQTINITCEVDANPVDNLNYKWHFNNSLESLIELPQLG 528

  Fly   791 NGTALLQIASVERSDI----------GNFTCIVDNQRGAPAAQNVLLVVQTAPEIDHSPG-FTRY 844
            .|..::..:..::|..          |....::..:.|..||      |:...|.:...| |..|
  Fly   529 QGAPVMLASGSDQSGYYQRSKRKHSHGMQQRLLHGRHGRMAA------VRFEDEDEDGYGEFEEY 587

  Fly   845 AARLGVRAQLICRSLASPQP-------SFIWRRHGKDLKMQRRNKFKSVERQV-----------D 891
            ...:|             ||       :.:.:.|.:..|.|:|.:....::|.           |
  Fly   588 GDEVG-------------QPFTQMVYSNMVHKNHVESSKQQQRKQLSPQQQQQQQQMASGGSSGD 639

  Fly   892 ALNFESALLIEN----------------TSP-------------------DDYGQYECVVRNSLG 921
            :......:::|.                |.|                   :.:|...||..:.:|
  Fly   640 SHTPSGGVILERKRLVALHKQHHRGGVATPPTTTAAPPLNNVYSYHVESYESFGAISCVASSPMG 704

  Fly   922 QASTTLEFSKPS-RPDAPLQLRVGNVSDTGVDLNWTPGFDGGMQTYFRLRLKQHGEDKYKYVDAK 985
            .::......:|: .|:........|.:...:.:...||:|||:..:|..::......:..| :|.
  Fly   705 HSAPCWYHIQPADLPEPVKNCTAYNATANSLQIQCIPGYDGGIPQHFHAQIYDELNRQILY-NAS 768

  Fly   986 PGHQNISLDGLKPGATYYFSVMAANEAGGSKFMPDIK-LTLSKGSQPHSAEYTEKDELPNVM--I 1047
            ..:...::..|...:.:...:.|.|..|.||....:: .|||......::......:|..::  :
  Fly   769 YKYSEFTVKRLPSDSVFVIRITAVNAQGASKVAYRLRGRTLSAPLLRTASSTAVLVQLTPLLGAL 833

  Fly  1048 IGITSAAMVLLVLNAALVAWFVIRRQNK--------------------------SQSEAEPSNDD 1086
            :|:. |.::|:.:...:|..|..:|..:                          |.|..|..|.|
  Fly   834 VGVI-ATLILVAICVVIVIKFRSKRGGRRHGSGADATTTEADKGSAEPLSRNMGSHSSLEDKNPD 897

  Fly  1087 VYSKD-DSQSVYKLPITALQADVQKKAAASTYLVENVDIIQ------STAYPP----------KY 1134
            |..:: :|:..:.          |::.|.....:|:..|:.      :||.||          :|
  Fly   898 VVPQEANSEDEFH----------QEEKAFDRLNMESQRILYTPPTRINTASPPPPSLSPTFGKQY 952

  Fly  1135 QESSMCT-PPYPLCN----------PDF--------TRTLPN-----PKRHSQRNSATGMIEGMQ 1175
            .|.|:.| |.:.|.|          |.:        |||.||     |.|......||....|  
  Fly   953 GELSLTTNPAFSLYNTPQRAPAVQRPVYTAPPPLLSTRTPPNIYTRIPGRGGGGGGATVTAAG-- 1015

  Fly  1176 MRSKDDHMLISNGLYIPSPSPASSLVIKGSYISSPSPAPP 1215
                      :.|.::|            :|.:..||..|
  Fly  1016 ----------AGGYHLP------------AYETRTSPTSP 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_001286439.1 Ig 44..122 CDD:299845
IG_like 45..137 CDD:214653
Ig 153..231 CDD:299845
IG_like 258..342 CDD:214653
Ig 266..327 CDD:299845
IG_like 357..>414 CDD:214653 17/94 (18%)
Ig 360..427 CDD:299845 17/107 (16%)
Ig <468..526 CDD:299845 18/59 (31%)
I-set 547..633 CDD:254352 17/86 (20%)
Ig 556..631 CDD:299845 17/75 (23%)
I-set 644..735 CDD:254352 24/106 (23%)
IGc2 668..725 CDD:197706 15/70 (21%)
IG_like 751..829 CDD:214653 10/87 (11%)
IGc2 753..815 CDD:197706 7/71 (10%)
Ig 852..928 CDD:143165 15/128 (12%)
FN3 935..1017 CDD:238020 15/81 (19%)
side-VNP_611765.2 Ig 42..153 CDD:299845 21/124 (17%)
IG_like 42..152 CDD:214653 21/123 (17%)
IGc2 179..245 CDD:197706 19/65 (29%)
IG_like 179..245 CDD:214653 19/65 (29%)
Ig <282..348 CDD:299845 15/67 (22%)
IGc2 400..459 CDD:197706 14/65 (22%)
FN3 719..798 CDD:214495 14/79 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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