DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hbs and Kirrel1

DIOPT Version :9

Sequence 1:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_006232737.1 Gene:Kirrel1 / 310695 RGDID:727883 Length:805 Species:Rattus norvegicus


Alignment Length:680 Identity:165/680 - (24%)
Similarity:244/680 - (35%) Gaps:210/680 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FAVHLATTICHVMAAVTAPTPAAQVAAPPVQ-KFHLTPHDLQILEGTDTLLRCEVSNRAGKVQWT 72
            :|.||      |:|.:...|.|  :|.|..| :|...|.|..::.|...:|.|.:.|.:|.||||
  Rat    30 WAPHL------VVAYLIFVTLA--LALPGTQTRFSQEPADQTVVAGHRAVLPCVLLNYSGIVQWT 86

  Fly    73 KDGFALGFSAVIPGFPRYSVLVDAKQNAYNLQIKNATLEDDAEYQCQVGPAAGNPAIRA-NAKLS 136
            |||.|||....:..:|||.|:..|....|||:|.:|.|.|||.|:||    |...|:|: .|||:
  Rat    87 KDGLALGMGQGLKAWPRYRVVGSADAGQYNLEITDAELSDDASYECQ----ATEAALRSRRAKLT 147

  Fly   137 IVAAPSSIVIEGYARNARVEVEERQNLTLHCIAENANPAAEIVWFQGEVPVSTAPIVTVNQTAPK 201
            ::..|....|:| .....::.....|||  |.|.||.|||.|:||:.......|...|......|
  Rat   148 VLIPPEDTRIDG-GPVILLQAGTPYNLT--CRAFNAKPAATIIWFRDGTQQEGAVTSTELLKDGK 209

  Fly   202 RFTTSSTLHLQPRAEDDYKEFSCEARHKALPPDVPMRAQVQLSVLYPPGAPFFEGYSQGETLHRG 266
            |.||.|.|.:||...|..:.|:|.:.::|:|..  ....::|.|.:||....   ..:.:|:..|
  Rat   210 RETTISQLLIQPTDLDIGRVFTCRSMNEAIPNG--KETSIELDVHHPPTVTL---SIEPQTVLEG 269

  Fly   267 QEVQIACRSRGGNPPAQLTWYRNGVAISSPQRTSGRLSENV-YKFTAAAEDNGANLVCEAKNLLA 330
            :.|...|::..........|.:.|..|.....:  |...|| |.|....      :.||..|.:.
  Rat   270 ERVIFTCQATANPEILGYRWAKGGFLIEDAHES--RYETNVDYSFFTEP------VSCEVYNKVG 326

  Fly   331 TTPLRAELNLTVLYAPKDVYLSGANQAKVGDSVQLSCVTAPSNPQARISWSINGRPLDNSTYKTT 395
            :|.:...:|  |.:||:.|.........:|..|.|:||                           
  Rat   327 STNVSTLVN--VHFAPRIVVYPKPTTTDIGSDVTLTCV--------------------------- 362

  Fly   396 SSSDGGWVSSSNISLTIDSQSRTFIAVCHALNTELTQNVVGSHTVNVLYPPSPPLLTGYNDGDIL 460
                  ||                                                         
  Rat   363 ------WV--------------------------------------------------------- 364

  Fly   461 ISGSILKLQCSSAGGNPPPTLQWYKNDKIINAPSKLVDSKITSELSLLVNASDNNAI-------- 517
                          ||||.||.|.|.|.  |...:|..|...:.||..|.::.|..:        
  Rat   365 --------------GNPPLTLTWTKKDS--NMGPRLPGSPPEANLSAQVLSNSNQLLLKSVTQAD 413

  Fly   518 ---YKC-----KVQNAAIDIPLFATKTLGVHFPP----ETVKISVVPKNLVPGIRAKLICDSSSS 570
               |.|     ::..|..::||:      |:.||    |.|:.:      |.|...|:.|...|:
  Rat   414 AGTYTCRAIVPRIGVAEREVPLY------VNGPPIISSEAVQFA------VRGDGGKVECFIGST 466

  Fly   571 NPPAKISW-WKDGIPVEGLNLANRPGLWGGSVSTLEMY-VNITQDLDGIV--------------- 618
            .||.:|:| ||:...               .|.|||.| |..|....|::               
  Rat   467 PPPDRIAWAWKENFL---------------EVGTLERYTVERTNSGSGVLSTLTINNVMEADFQT 516

  Fly   619 -YTCQSHNE------VLQRSVHETISLDIL 641
             |.|.:.|.      ::|....|.:.:.|:
  Rat   517 HYNCTAWNSFGPGTAIIQLEEREVLPVGII 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_001286439.1 Ig 44..122 CDD:299845 34/77 (44%)
IG_like 45..137 CDD:214653 40/92 (43%)
Ig 153..231 CDD:299845 26/77 (34%)
IG_like 258..342 CDD:214653 17/84 (20%)
Ig 266..327 CDD:299845 13/61 (21%)
IG_like 357..>414 CDD:214653 7/56 (13%)
Ig 360..427 CDD:299845 7/66 (11%)
Ig <468..526 CDD:299845 18/73 (25%)
I-set 547..633 CDD:254352 23/109 (21%)
Ig 556..631 CDD:299845 23/98 (23%)
I-set 644..735 CDD:254352
IGc2 668..725 CDD:197706
IG_like 751..829 CDD:214653
IGc2 753..815 CDD:197706
Ig 852..928 CDD:143165
FN3 935..1017 CDD:238020
Kirrel1XP_006232737.1 I-set 54..148 CDD:254352 41/97 (42%)
Ig 57..148 CDD:299845 40/94 (43%)
Ig2_KIRREL3-like 170..251 CDD:143236 29/84 (35%)
I-set 255..336 CDD:254352 18/93 (19%)
Ig_2 259..337 CDD:290606 17/90 (19%)
Ig_2 340..437 CDD:290606 30/208 (14%)
IG_like 346..437 CDD:214653 28/202 (14%)
Ig5_KIRREL3 439..536 CDD:143306 27/117 (23%)
IG_like 451..536 CDD:214653 23/105 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141865at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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