DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbs and Sirpa

DIOPT Version :9

Sequence 1:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_001277948.1 Gene:Sirpa / 19261 MGIID:108563 Length:513 Species:Mus musculus


Alignment Length:359 Identity:81/359 - (22%)
Similarity:131/359 - (36%) Gaps:89/359 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 GDSVQLSCVTAPSNPQARISWSINGRPLDNSTY--------KTTSSSDGGWVSSSNISLTIDSQS 416
            |||..|:|......|...|.|.....|.....|        :..:.||....::.:.|:.|.:.:
Mouse    48 GDSTVLNCTLTSLLPVGPIRWYRGVGPSRLLIYSFAGEYVPRIRNVSDTTKRNNMDFSIRISNVT 112

  Fly   417 RTFIAVCHAL---------NTELTQNVVGSHTVNVLYPPSPPLLTGYNDGDILISGSILKLQCSS 472
            .....:.:.:         :||:...  |...|.||..||||.::|  ..|..|....:...|.|
Mouse   113 PADAGIYYCVKFQKGSSEPDTEIQSG--GGTEVYVL
AKPSPPEVSG--PADRGIPDQKVNFTCKS 173

  Fly   473 AGGNPPP-TLQWYKN-------DKIINAPSKLVDSKITSELSLLVNASDNNAIYKCKVQNAAID- 528
            .|.:|.. ||:|:|:       :..:|...|.|...|:|.:.:::|:.|.|:...|:|.:..:| 
Mouse   174 HGFSPRNITLKWFKDGQELHPLETTVNPSGKNVSYNISSTVRVVLNSMDVNSKVICEVAHITLDR 238

  Fly   529 IPLFATKTLG--VHFPPETVKI---SVVPKNLVPGIRAKLICDSSSSNPPAKISWWKDGIPVEGL 588
            .||.....|.  :...| |||:   |....|.|     .|.|.:....|             |.|
Mouse   239 SPLRGIANLSNFIRVSP-TVKVTQQSPTSMNQV-----NLTCRAERFYP-------------EDL 284

  Fly   589 NLANRPGLW--GGSVSTLEMYVNITQDLDG------------------IVYTCQ---------SH 624
            .|     :|  .|:||..:...|:|::.||                  :|:|||         :.
Mouse   285 QL-----IWLENGNVSRNDTPKNLTKNTDGTYNYTSLFLVNSSAHREDVVFTCQVKHDQQPAITR 344

  Fly   625 NEVLQRSVHETISLDI-LYPPKFETPQSTTFVGV 657
            |..:....|.:....: .:|....|.....|:||
Mouse   345 NHTVLGFAHSSDQGSMQTFPDNNATHNWNVFIGV 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_001286439.1 Ig 44..122 CDD:299845
IG_like 45..137 CDD:214653
Ig 153..231 CDD:299845
IG_like 258..342 CDD:214653
Ig 266..327 CDD:299845
IG_like 357..>414 CDD:214653 14/61 (23%)
Ig 360..427 CDD:299845 14/83 (17%)
Ig <468..526 CDD:299845 18/65 (28%)
I-set 547..633 CDD:254352 23/117 (20%)
Ig 556..631 CDD:299845 20/103 (19%)
I-set 644..735 CDD:254352 4/14 (29%)
IGc2 668..725 CDD:197706
IG_like 751..829 CDD:214653
IGc2 753..815 CDD:197706
Ig 852..928 CDD:143165
FN3 935..1017 CDD:238020
SirpaNP_001277948.1 Ig 35..146 CDD:416386 18/99 (18%)
FR1 35..56 CDD:409353 4/7 (57%)
Ig strand A 35..38 CDD:409353
Ig strand A' 42..46 CDD:409353
Ig strand B 49..57 CDD:409353 4/7 (57%)
CDR1 57..63 CDD:409353 0/5 (0%)
FR2 64..72 CDD:409353 2/7 (29%)
Ig strand C 64..70 CDD:409353 2/5 (40%)
CDR2 73..87 CDD:409353 2/13 (15%)
Ig strand C' 76..79 CDD:409353 0/2 (0%)
Ig strand C' 85..88 CDD:409353 0/2 (0%)
FR3 88..126 CDD:409353 4/37 (11%)
Ig strand D 89..93 CDD:409353 0/3 (0%)
Ig strand E 103..109 CDD:409353 1/5 (20%)
Ig strand F 117..124 CDD:409353 0/6 (0%)
CDR3 127..132 CDD:409353 0/4 (0%)
Ig strand G 132..137 CDD:409353 2/4 (50%)
FR4 133..146 CDD:409353 4/14 (29%)
Ig strand G' 140..145 CDD:409353 1/4 (25%)
IgC1_SIRP_domain_2 148..250 CDD:409429 29/103 (28%)
Ig strand B 167..171 CDD:409429 0/3 (0%)
Ig strand C 182..186 CDD:409429 2/3 (67%)
Ig strand E 212..216 CDD:409429 1/3 (33%)
Ig strand F 226..231 CDD:409429 1/4 (25%)
Ig strand G 242..245 CDD:409429 0/2 (0%)
IgC1_SIRP_domain_3 253..348 CDD:409507 26/118 (22%)
Ig strand B 270..274 CDD:409507 2/8 (25%)
Ig strand C 285..289 CDD:409507 1/8 (13%)
Ig strand E 315..319 CDD:409507 0/3 (0%)
Ig strand F 329..334 CDD:409507 3/4 (75%)
Ig strand G 343..346 CDD:409507 0/2 (0%)
SH2-binding. /evidence=ECO:0000255 440..443
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..513
SH3-binding. /evidence=ECO:0000255 450..455
SH2-binding. /evidence=ECO:0000255 464..467
SH2-binding. /evidence=ECO:0000255 481..484
SH2-binding. /evidence=ECO:0000255 505..508
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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