DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbs and syg-2

DIOPT Version :10

Sequence 1:NP_788355.1 Gene:hbs / 44129 FlyBaseID:FBgn0287864 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_001309674.1 Gene:syg-2 / 181561 WormBaseID:WBGene00007750 Length:1230 Species:Caenorhabditis elegans


Alignment Length:1237 Identity:359/1237 - (29%)
Similarity:542/1237 - (43%) Gaps:174/1237 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QKFHLTPHDLQILEGTDTLLRCEVSNRAGKV---QW-TKDGFALGF--SAVIPGFP-RYSVLVDA 96
            |.|..:|.:|..:.|.....||........:   || :..|..||:  ..::||.. |:|.:   
 Worm    19 QFFLESPSNLSTIAGESITFRCSAEKSPEPIVYSQWKSNTGSLLGYHQEGILPGHQGRFSYI--- 80

  Fly    97 KQNAYNLQIK--NATLEDDAEYQCQV-----GPAAGNPAIRANAKLSIVAAPSSIVIEGYARNAR 154
            ||||..|.:|  :..|:||.||:||:     ||      |||.:.|:|:..|..:....|..|:.
 Worm    81 KQNAEELHLKITHVNLDDDGEYECQMLHPEEGP------IRAKSFLNIIVPPQLVYFSNYQPNSI 139

  Fly   155 VEVEERQNLTLHCIAENANPAAEIVWF-QGEV---PVSTAPIVTVNQTAPKRFTTSSTLHLQPRA 215
            :.|:|...|.:.|:..|..|..|::|: .|:|   .|..|....:|:|    ||..::|.:|...
 Worm   140 IAVKENTPLNITCVVPNVKPEPEVLWYMDGKVMSRDVKQASTPHLNKT----FTVYTSLVVQSDR 200

  Fly   216 EDDYKEFSCEARHKALPPDVPMRAQVQLSVLYPPGAPFFEGYSQGETLHRGQEVQIACRSRGGNP 280
            .|..|..:|||..|  ..|:.:.....|.||:||..|..|.......|..|..|.|||...||||
 Worm   201 NDHGKVITCEAFQK--ETDIRITTNTTLDVLFPPSDPTVEILRNPSALRSGDNVTIACSVTGGNP 263

  Fly   281 PAQLTWYRNGVAISSPQRTSGRLSE--NVYKFTAAAEDNGANLVCEAKNLLATTPLRAELNLTVL 343
            |..:.||.....:.|......|..|  |:|.|.|:..||.|...|.|.|.....|.|..:.|.|.
 Worm   264 PPDVFWYHENKRLQSHSTLDTRSKEIKNIYSFIASQNDNMAEYECRANNSRTGNPKRKAMKLEVN 328

  Fly   344 YAPKDVYLSGANQAKVGDSVQLSCVTAPSNPQARISWSINGRPLDNSTYKTTSSSDGGWVSSSNI 408
            |.|..|.|.|.:..:.|.|..:.|.:.||||.::|:|.||||.:...|.: ....:.|.|||||:
 Worm   329 YPPASVELFGESNIRYGSSANIQCKSLPSNPASQITWIINGRSVPTPTQR-EFVVENGIVSSSNV 392

  Fly   409 SLTIDSQSRTFIAVCHALNTE-LTQNVVGS----HTVNVLYPPSPPLLTGYNDGDILISGSILKL 468
            |:    .|.......|.:|.| :..|..||    |.:.::.||..|::||..|.. ...|.|:.:
 Worm   393 SV----HSNELSVEAHQINVECMATNPEGSSAKQHVIKIIAPPKAPIITGLEDRK-FFEGDIVNV 452

  Fly   469 QCSSAGGNPPPTLQWYKNDK--IINAPSKLVDSKIT------------SELSLLVNASDNNAIYK 519
            .|.:.||||...|.||:..:  ::....|:..|::.            |.|:|.|:.:.|....|
 Worm   453 TCEAQGGNPLAELSWYRGSEKHLVKGRKKMKWSQVNGAHNEVAGFSSYSTLALRVDRTMNTQRLK 517

  Fly   520 CKVQNAAIDIPLFATKTLGVHFPPETVKISVV---PKNLVPGIRAKLICDSSSSNPPAKISWW-- 579
            |:..|||:|.||..::.|.|::||..|.|...   .:.|:.|..|:|:|.:.||||.|.|||.  
 Worm   518 CEATNAALDEPLIESQYLSVYYPPRRVLIRPADSGDQRLLVGKSARLVCGTLSSNPAAHISWQFS 582

  Fly   580 ------KDGIPVEGLNLANRPGLWGGSVSTLEMYVNITQDLDGIVYTCQSHNEVLQRSVHETISL 638
                  |..:....||...|..  |.:|..:..:.. |::.||.|..|.:::...:.||:.:..|
 Worm   583 RATDDNKVHLGDVSLNETTRDN--GFNVENVLSFTP-TEEYDGTVVHCIANHPEWKHSVNTSFPL 644

  Fly   639 DILYPPKFETPQSTTFVGVEGAPFHVELLASGNPMVITYTWTKDGLPISSNSLSGQRLISDGPRL 703
            :::||||.......|.|..||..|...|...|||.:..:.|.|:|:|.....   .|:.:.|..|
 Worm   645 NVMYPPKMLVNDPVTVVMSEGDSFKENLTVRGNPAISLWQWRKNGVPFDHTI---GRVFARGAVL 706

  Fly   704 NISRLSRNDAGVYICEALNSQGTALLEIQVAVEYAPTITAVSEGRSFVAGEPAVLACHIQARPLE 768
            :..:|...|||||...|.||.|:..:.|::||||:..||::|.......|:..:|.|.....|.:
 Worm   707 SGKQLLSTDAGVYTLTATNSVGSTNITIKLAVEYSARITSISTPVIAATGDTVLLECEADGEPSK 771

  Fly   769 AAHVRWSRDGYDLATRTISSFENG--TALLQIASVERSDIGNFTCIVDNQRGAPAAQNVLLVVQT 831
            |..:.|.::|..||.:     ..|  .|:|::.:.|:.. |.:||..||..|.||.....|:|.:
 Worm   772 ANMIHWYKNGEILAAQ-----HRGHKKAILRLNATEQQS-GEYTCKADNGIGVPAEGQTFLLVNS 830

  Fly   832 APEIDHSPGFTRYAARLGVRAQLICRSLASPQPSFIWRRHGKDLKMQRRN--KFKSVERQVDALN 894
            ||.:.....:.:.|..||..|:..|:..|.|...|:|.   ||.::.::|  |:..|..|:|...
 Worm   831 APRVLPVARYAKTAGILGGVAKARCKVYAVPTVEFVWE---KDEQLIKKNSSKYSIVNTQIDYST 892

  Fly   895 FESALLIENTSPDDY-GQYECVVRNSLGQASTTLEFSKPSRPDAPLQLRVGNVSDTGVDLNWTPG 958
            :||.|.|:|..|||| .:.:|:.|||.|....::....|:.||.|..|.:.|.:...:.:.|.|.
 Worm   893 YESTLWIKNIVPDDYTKKVKCIARNSFGTDHLSIPIIPPTHPDEPFNLTMTNSTLNTISVAWEPR 957

  Fly   959 FDGGMQTYFRLRLKQHGEDKYKYVDAKPGHQNISLDGLKPGATYYFSVMAANEAG--GSKFMPDI 1021
            ||||....|.::.::..:|....|:..  |.|:.|.||....||:|.:.:.|..|  .|...|.|
 Worm   958 FDGGSDQIFEVKYRRQNDDLIHLVNTT--HTNLRLSGLATANTYFFQIRSINARGFASSWTSPVI 1020

  Fly  1022 KLTLSKGSQPHSAEYTEKDEL----PNVMIIGITSAAMVLLVLNAALVAWFVIRRQNKSQSEAEP 1082
            ..||::.....:....||.:|    |.::|.      :||.:|...::..||..|..|.:...:.
 Worm  1021 FATLNEDGVNVAMIRNEKLKLTTWIPYILIF------IVLFMLLNVVICCFVCNRTKKRKLREKT 1079

  Fly  1083 ----------------------SNDDVYSKD---------DSQSV----------YKLPITALQA 1106
                                  .||.:..:|         |..||          |..||..:  
 Worm  1080 EMARTAINGGDVRQVQMYGTMMGNDGMSRRDIDDRPEMSEDEHSVRTMIEVSPNGYMQPIEPM-- 1142

  Fly  1107 DVQKKAAASTYLVENVDIIQSTAYPPKYQESSMCT-------PPYPLCNPDFTRTLPNPKRHSQR 1164
                       |.|:..:::.......|..||..|       .|||  .|      |.|..||..
 Worm  1143 -----------LYESTGLLEYDYQTRSYMGSSQGTRSMTYANVPYP--EP------PQPSYHSNW 1188

  Fly  1165 NS 1166
            ||
 Worm  1189 NS 1190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_788355.1 IG_like 45..137 CDD:214653 33/105 (31%)
Ig strand B 56..60 CDD:409353 0/3 (0%)
Ig strand C 68..72 CDD:409353 2/7 (29%)
Ig strand E 91..105 CDD:409353 6/13 (46%)
Ig strand F 115..120 CDD:409353 3/4 (75%)
Ig strand G 128..131 CDD:409353 1/2 (50%)
Ig 162..232 CDD:472250 22/73 (30%)
Ig strand B 162..167 CDD:409353 1/4 (25%)
Ig strand C 177..181 CDD:409353 1/3 (33%)
Ig strand E 207..211 CDD:409353 1/3 (33%)
Ig strand F 221..226 CDD:409353 1/4 (25%)
Ig 246..342 CDD:472250 34/97 (35%)
Ig strand B 269..273 CDD:409353 2/3 (67%)
Ig strand C 283..287 CDD:409353 0/3 (0%)
Ig strand F 320..325 CDD:409353 1/4 (25%)
Ig strand G 335..338 CDD:409353 1/2 (50%)
Ig 343..431 CDD:472250 30/88 (34%)
Ig strand B 363..367 CDD:409353 0/3 (0%)
Ig strand C 377..381 CDD:409353 1/3 (33%)
Ig strand E 406..410 CDD:409353 2/3 (67%)
Ig strand F 420..425 CDD:409353 0/4 (0%)
Ig 443..527 CDD:472250 27/97 (28%)
Ig strand B 466..470 CDD:409353 0/3 (0%)
Ig strand C 480..484 CDD:409353 1/3 (33%)
Ig strand E 503..507 CDD:409353 2/3 (67%)
Ig strand F 517..522 CDD:409353 2/4 (50%)
Ig 554..640 CDD:472250 27/93 (29%)
Ig strand B 561..565 CDD:409353 2/3 (67%)
Ig strand C 575..579 CDD:409353 2/3 (67%)
Ig strand E 602..608 CDD:409353 0/5 (0%)
Ig strand F 618..623 CDD:409353 2/4 (50%)
Ig strand G 633..636 CDD:409353 0/2 (0%)
Ig_3 643..722 CDD:464046 26/78 (33%)
Ig 748..829 CDD:472250 22/82 (27%)
Ig strand B 756..760 CDD:409353 1/3 (33%)
Ig strand C 769..775 CDD:409353 1/5 (20%)
Ig strand E 792..798 CDD:409353 3/7 (43%)
Ig strand F 808..813 CDD:409353 2/4 (50%)
Ig strand G 822..825 CDD:409353 0/2 (0%)
Ig_3 833..918 CDD:464046 27/87 (31%)
FN3 <932..1151 CDD:442628 61/272 (22%)
FN3 935..1017 CDD:238020 25/83 (30%)
syg-2NP_001309674.1 IG_like 25..105 CDD:214653 25/82 (30%)
Ig strand B 36..40 CDD:409353 0/3 (0%)
Ig strand C 49..55 CDD:409353 1/5 (20%)
Ig strand E 83..91 CDD:409353 3/7 (43%)
Ig strand F 101..105 CDD:409353 2/3 (67%)
Ig 139..228 CDD:472250 26/94 (28%)
Ig strand B 148..152 CDD:409353 1/3 (33%)
Ig strand C 162..166 CDD:409353 1/3 (33%)
Ig strand E 192..196 CDD:409353 1/3 (33%)
Ig strand F 206..211 CDD:409353 1/4 (25%)
Ig strand G 221..224 CDD:409353 0/2 (0%)
Ig_3 235..312 CDD:464046 27/76 (36%)
Ig 430..537 CDD:472250 32/107 (30%)
Ig strand B 450..454 CDD:409353 0/3 (0%)
Ig strand C 464..468 CDD:409353 1/3 (33%)
Ig strand E 501..505 CDD:409353 2/3 (67%)
Ig strand F 515..520 CDD:409353 2/4 (50%)
Ig strand G 530..533 CDD:409353 0/2 (0%)
Ig 540..635 CDD:472250 28/97 (29%)
Ig strand B 562..566 CDD:409353 2/3 (67%)
Ig strand C 576..585 CDD:409353 3/8 (38%)
Ig strand E 610..614 CDD:409353 0/3 (0%)
Ig strand F 624..629 CDD:409353 2/4 (50%)
Ig 657..738 CDD:472250 27/83 (33%)
Ig strand B 668..672 CDD:409353 1/3 (33%)
Ig strand C 682..686 CDD:409353 0/3 (0%)
Ig strand F 718..723 CDD:409353 2/4 (50%)
Ig strand G 731..734 CDD:409353 0/2 (0%)
Ig_3 743..814 CDD:464046 19/76 (25%)
Ig 848..922 CDD:472250 28/76 (37%)
Ig strand B 851..855 CDD:409353 1/3 (33%)
Ig strand C 865..868 CDD:409353 1/2 (50%)
Ig strand E 895..899 CDD:409353 2/3 (67%)
Ig strand F 910..915 CDD:409353 1/4 (25%)
FN3 934..1023 CDD:238020 27/90 (30%)

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