DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbs and syg-1

DIOPT Version :9

Sequence 1:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_001123159.1 Gene:syg-1 / 180555 WormBaseID:WBGene00006365 Length:730 Species:Caenorhabditis elegans


Alignment Length:559 Identity:129/559 - (23%)
Similarity:208/559 - (37%) Gaps:131/559 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QKFHLTPHDLQILEGTDTLLRCEVSNRAGKVQWTKDGFALGF--SAVIPGFPRYSVLVDAKQNAY 101
            |:....|.|.....|...:|.|.|.::.|.|||.||.|.||.  ...:||..||.::..|....|
 Worm    23 QRIVEAPKDTLAAVGETAILTCRVEHQQGPVQWMKDDFGLGTDRDKPLPGNKRYRMVGSAANGEY 87

  Fly   102 NLQIKNATLEDDAEYQCQVGPA-AGNPAIRANAKLSIVAAPS--SIVIEGYARNARVEVEERQNL 163
            ||:|.|.||.||.::.||:..: .....:.:.|||:::..|:  .||...::..|..    ...:
 Worm    88 NLEISNVTLFDDDDFACQISESDHAKAVVSSKAKLTVLVRPTPPKIVKSHHSLKAIA----GDPI 148

  Fly   164 TLHCIAENANPAAEIVW---------------------FQG-----EVPVSTAPIVTVNQTAPKR 202
            |..|::....|...|.|                     |.|     |:...|. |..||:|....
 Worm   149 TQSCLSRKGKPPPTIGWAIASDEHGKHIVSWLGESRSKFGGIHAKPEISQETV-IAHVNETTQVE 212

  Fly   203 ------------FTTSSTLHLQPRAEDDYKEFSCEARHKALPPDVPMRAQVQLSVLYPP------ 249
                        ::..|.|...||.|||:|...|.::|...|..:.:.: |:||:.|.|      
 Worm   213 EGGNNSREDSSIYSIMSNLSFIPRPEDDHKYLICISQHMTFPNKIEVDS-VKLSLRYAPQINLTV 276

  Fly   250 --GAPFFEGYSQGETLHRGQEVQIACRSRGGNP--PAQLTWYRNGVAISSPQRTSGRLSENVYKF 310
              ..|..|   .|..|       :|| :....|  ..:::||:....:   :.|...|:....|.
 Worm   277 ASKLPLRE---NGSAL-------LAC-NVNAKPLDNVKISWYKGNQKL---RETGDTLTFETLKM 327

  Fly   311 TAAAEDNGANLVCEAKNLLATTPLRAELNLTVLYAPKDVYLSGANQAKVGDSVQLSCVTAPSNPQ 375
                ||:..::.|||.|.:.||  |..:.|.|.:..:.:..|...:...||:....|.|. :||.
 Worm   328 ----EDHNRDIFCEATNEIGTT--RGSIKLNVAFGARIMSTSQDKEVNEGDNAFFHCATL-ANPA 385

  Fly   376 ARISWSINGRPLDNSTYKTTSSSDGGWVSSSNISLTIDSQSRTFIAVCHALNTELTQNVVG---- 436
            ..|.|             |...||.  :.....:||:::     :......|...|..|.|    
 Worm   386 PAIFW-------------TRGDSDE--IIGHGENLTLEN-----VRTWQQGNYNCTATVEGFRKQ 430

  Fly   437 --SHTVNVLYPPSPPLLTGYNDGDILISGSI---LKLQCSSAGGNPPPTLQWYKNDKIINAPSKL 496
              ||.:::..||:..:...       :|.|:   .::.|..:|......::|..|.|.||    .
 Worm   431 ILSHYLHIRGPPTVSMKDE-------VSASLDEATEIICEISGRPKTNNVRWTVNGKEIN----F 484

  Fly   497 VDSKIT-----------SELSLLVNASDNNAIYKCKVQN 524
            .:.:||           |.|.:.....::..:|.|...|
 Worm   485 NNGRITVHQYPKPYGKESILKIKDLKEEDFGVYNCSANN 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_001286439.1 Ig 44..122 CDD:299845 31/79 (39%)
IG_like 45..137 CDD:214653 34/94 (36%)
Ig 153..231 CDD:299845 24/115 (21%)
IG_like 258..342 CDD:214653 20/85 (24%)
Ig 266..327 CDD:299845 13/62 (21%)
IG_like 357..>414 CDD:214653 13/56 (23%)
Ig 360..427 CDD:299845 13/66 (20%)
Ig <468..526 CDD:299845 14/68 (21%)
I-set 547..633 CDD:254352
Ig 556..631 CDD:299845
I-set 644..735 CDD:254352
IGc2 668..725 CDD:197706
IG_like 751..829 CDD:214653
IGc2 753..815 CDD:197706
Ig 852..928 CDD:143165
FN3 935..1017 CDD:238020
syg-1NP_001123159.1 I-set 24..124 CDD:254352 34/99 (34%)
Ig 30..124 CDD:299845 33/93 (35%)
Ig <151..265 CDD:299845 24/115 (21%)
Ig_2 276..353 CDD:290606 22/96 (23%)
IG_like 283..353 CDD:214653 21/89 (24%)
IG_like 363..427 CDD:214653 17/84 (20%)
Ig_2 368..438 CDD:290606 19/90 (21%)
Ig 440..528 CDD:299845 18/95 (19%)
IG_like 450..535 CDD:214653 16/78 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141865at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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