DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbs and Myom2

DIOPT Version :9

Sequence 1:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_006508790.1 Gene:Myom2 / 17930 MGIID:1328358 Length:1486 Species:Mus musculus


Alignment Length:1343 Identity:241/1343 - (17%)
Similarity:436/1343 - (32%) Gaps:426/1343 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 AGKVQWTKDGFALGFSAV-IPGFPRYSVLVDAKQNAYNLQI----------KNATLEDDAEYQCQ 119
            :.|.:|:|....|..|.| :|.:.:.....|  |:..|:|.          |.||.:..:    |
Mouse    10 SAKTEWSKSVGTLKMSLVAVPFYQKRHKHFD--QSYRNIQTRYLLDQYALKKQATTQSSS----Q 68

  Fly   120 VGPAAGNPAIRANAKLSIVAAPSSIVIEGYARNARVEVEE----RQNLTLHCIAENANPAAEIVW 180
            ......:.:.||:::.|..|....:..:..:.:...|||.    |.....:..|:.....:|:..
Mouse    69 RSLTERSSSKRASSQSSAGAMTCRLCAKRVSASEEEEVENENRYRSQAASYGEAKRQRFLSELAQ 133

  Fly   181 FQGEVPVSTAPIVTVNQTAPKRFTTSSTLHLQPRAEDD--YKEFSCEARHKALPPDVPMRAQVQL 243
            .:..|.::.:   .......|.|       ::...||:  ::..|.|.| .:..|::.:|.    
Mouse   134 LEENVHLARS---QARDKLDKYF-------MEQTVEDNLAWERHSFEDR-MSRAPEILVRL---- 183

  Fly   244 SVLYPPGAPFFEGYSQGETLHRGQEVQIACRSRGGNPPAQLTWYRNGVAI-----SSPQRTSGRL 303
                           :..|:.....|:: |.:..|.|...:.||::|..|     ....|...|.
Mouse   184 ---------------RSHTIWERMSVRL-CFTVQGFPTPVVQWYKDGSLICQAGEPGKYRIESRY 232

  Fly   304 S-----------ENVYKFTAAAEDNGANLVCEAKNLL------------ATTPLRAELNLTVLYA 345
            .           |:...::|.|.::...:...|..::            ...|:...|:..:.|.
Mouse   233 GVHTLEINRANFEDTATYSAVATNSHGQVSTNAAVVVRRYRGEEEPFHSVGLPIGLPLSSVIPYT 297

  Fly   346 PKDV-YLS--GANQAKVGDSVQLSC--VTAP--SNPQARISWSINGRPLDNSTYKTTSSSDG-GW 402
            ..|| :|.  |....:.|::|.|.|  :..|  ...|.|..|..:...|..|  |.|....| |.
Mouse   298 HFDVQFLEKFGVTFRREGETVTLKCTLLVTPDLKRVQPRAEWYRDDVLLKES--KWTKMFFGEGQ 360

  Fly   403 VSSSNISLTIDSQSRTFIAVCHALNTELTQNVVGSHTVNVLYPPSPPLLTGYNDGDILISGSILK 467
            .|.|...|..|.:....:.:       :::..|..|:..:....:.||:||       ..|:.:.
Mouse   361 ASLSFSHLNKDDEGLYTLRI-------VSRGGVSDHSAFMFVRDADPLVTG-------APGAPMD 411

  Fly   468 LQCSSAGGN-------PPPTL------------------QWYK-NDKIINAPSKLVDSKITS--- 503
            |||..|..:       ||.|.                  .|.: ||    ||.|:....:|.   
Mouse   412 LQCHDANRDYVIVTWKPPNTTTESPVIGYFIDKCEVGTNNWVQCND----APVKICKYPVTGLFE 472

  Fly   504 --ELSLLVNASDNNAIYK-CKVQN--AAIDIPLFATKTLGVHF---------------------P 542
              .....|.|.:|..|.: .::.:  ||:| |:...:...:|.                     |
Mouse   473 GRSYVFRVRAVNNAGISRPSRISDAVAALD-PVDLRRLQAIHLEGEKEIVIYQDDLEGDVQIPGP 536

  Fly   543 PETVKISVVPKNLVPGIRAKLICDSSSSNPPAKISWWKDGIPVEGLNLANRPGLWGGSVSTLEMY 607
            |..|:.|.|.:|.|          ..|.:||:...  ||.:    :....:..:..||...:...
Mouse   537 PTNVQASEVSRNYV----------VLSWDPPSPRG--KDPL----MYFIEKSAVGSGSWQRVNAQ 585

  Fly   608 VNITQ------DL-DGIVYTCQSHNEVLQRSVHETISLDILYPPKFETP--QSTTFVGVEGAPFH 663
            ..:..      || :|..|..:    ||..:.|.      |..|...||  |:...:.|..||..
Mouse   586 TAVRSPRYAVFDLAEGKSYVFR----VLSANKHG------LSDPSEITPPIQAQDMIVVPSAPGR 640

  Fly   664 VELLASGNPMV-ITYTWTK-----DGL---------------PISSNSLSGQRLISDGPRLNISR 707
            |  |||.|... :...|.:     |.|               |.:...:...|.:..|       
Mouse   641 V--LASRNTKTSVVVQWDRPKHEEDLLGYYVDCCVAGTNMWEPCNHKPIGYNRFVVHG------- 696

  Fly   708 LSRNDAGVYICEALNSQGTA-------LLEIQVAVEYAPT----ITAVS-EGRSFV--------A 752
            |:..:..::..:|:|:.||:       ::::|.|:. .|:    ||.:: :|.|..        :
Mouse   697 LTTGEQYIFRVKAVNAVGTSENSQESEVIKVQAALT-VPSHPYGITLLNCDGHSMTLGWKVPKFS 760

  Fly   753 GEPAVLACHIQARPLEAAHVRWSRDGYDLATRTISSFENGTALLQIASVERSDIGNFTCIVDNQR 817
            |..|::..::..|  |..|..|         ..::|......:|.:..:....:..|..      
Mouse   761 GGSAIIGYYLDKR--EVHHKNW---------HEVNSSPVKERILTVEGLTEGSLYEFKI------ 808

  Fly   818 GAPAAQNVLLVVQTAPEIDHSPGFTRYAARLGVRAQLICRSLASPQPSFIWRRHGKDLKMQRRNK 882
               ||.|:..:.|.:...:|                ..|.:...|:|...:     ||..     
Mouse   809 ---AATNLAGIGQPSDPSEH----------------FKCEAWTDPEPGPAY-----DLTF----- 844

  Fly   883 FKSVERQVDALNFESALLIENTSPDDYGQYECVVRNSLGQASTTLEFSKPSRPDAPLQLRVGNVS 947
                                           |.||                              
Mouse   845 -------------------------------CEVR------------------------------ 848

  Fly   948 DTGVDLNW-TPGFDGG--MQTYFRLRLKQHGEDKYKYV-DAKPGHQNISLDGLKPGATYYFSVMA 1008
            ||.:.:.| .|.:.|.  :..|| :..|:....::|.. :|...::.:.:..|:.|.||.|.:.|
Mouse   849 DTSLVILWKAPVYSGSSPVSGYF-VDFKEEDSGEWKTTSEAATPNRYLKVCDLQQGKTYVFRIRA 912

  Fly  1009 ANEAGGSKFMPDIKLTLSKGSQPHSAEYTE-KDELPNVMIIGITSAAMVLLVLNAALVAWF---- 1068
            .|.:|..| ..|....:...::|.:.|.:. .||..|: .:|.....|.    :|:...|.    
Mouse   913 VNASGPGK-PSDTSEPVLVEARPGTKEISAGVDEEGNI-YLGFDCQEMT----DASQFTWCKAYE 971

  Fly  1069 VIRRQNKSQSEAEPSNDDVYSKD-DSQSVYKLPITALQADVQKKAAASTYLVENVDIIQSTAYPP 1132
            .|..:.:.:...|..:..:|.|: |.:.:....::....|    ..:|:::::..::.:..|.  
Mouse   972 EIADEERFEVHTEGDHSKLYFKNPDKEDLGTYSVSVSDTD----GVSSSFVLDEEELERLMAL-- 1030

  Fly  1133 KYQESSMCTPPYPL----------------------CNPDFT-RTLPNPKRHSQRNS-------A 1167
               .:.:..|..||                      .:||.: |.:.|.:..|..::       :
Mouse  1031 ---SNEIKNPTIPLKSELAYEIFDKGQVRFWLQAEHLSPDASFRFIINDREVSDSDTHRIKCDRS 1092

  Fly  1168 TGMIEGMQMRSKDDHMLISN-GLYI-----PSPSPASSLVIKG 1204
            ||||| |.|    |...|.| |.|.     ......||||:.|
Mouse  1093 TGMIE-MVM----DRFTIENEGTYTVQIQDGKAKNQSSLVLIG 1130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_001286439.1 Ig 44..122 CDD:299845 15/66 (23%)
IG_like 45..137 CDD:214653 17/81 (21%)
Ig 153..231 CDD:299845 14/83 (17%)
IG_like 258..342 CDD:214653 17/111 (15%)
Ig 266..327 CDD:299845 14/76 (18%)
IG_like 357..>414 CDD:214653 17/61 (28%)
Ig 360..427 CDD:299845 18/71 (25%)
Ig <468..526 CDD:299845 18/91 (20%)
I-set 547..633 CDD:254352 17/92 (18%)
Ig 556..631 CDD:299845 14/81 (17%)
I-set 644..735 CDD:254352 24/120 (20%)
IGc2 668..725 CDD:197706 12/77 (16%)
IG_like 751..829 CDD:214653 12/85 (14%)
IGc2 753..815 CDD:197706 9/61 (15%)
Ig 852..928 CDD:143165 8/75 (11%)
FN3 935..1017 CDD:238020 18/85 (21%)
Myom2XP_006508790.1 I-set 177..269 CDD:369462 17/111 (15%)
Ig 313..395 CDD:386229 20/90 (22%)
FN3 406..498 CDD:238020 19/95 (20%)
FN3 534..626 CDD:238020 25/117 (21%)
FN3 635..725 CDD:238020 18/98 (18%)
FN3 734..824 CDD:238020 18/109 (17%)
FN3 836..926 CDD:238020 26/162 (16%)
IG <963..1018 CDD:214652 8/58 (14%)
Ig_M-protein_C 1367..1458 CDD:143299
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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