DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hbs and side

DIOPT Version :10

Sequence 1:NP_788355.1 Gene:hbs / 44129 FlyBaseID:FBgn0287864 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_061499735.1 Gene:side / 1281499 VectorBaseID:AGAMI1_000974 Length:949 Species:Anopheles gambiae


Alignment Length:1057 Identity:211/1057 - (19%)
Similarity:362/1057 - (34%) Gaps:296/1057 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 PKRFTTSSTLHLQPRAED-DYKEFSCEARHKALPPDVPMRAQVQLSVLYPPGAPFFEGYSQGETL 263
            |:|.....|:.....:.| |.:.:.|. |.:.:.||              |..|.....|...:.
Mosquito    47 PERAALEPTVESSSGSVDGDGRRWQCR-RQRPVQPD--------------PVWPLCPSSSSSAST 96

  Fly   264 HRGQEVQIACRSRGGNPPAQLTWYR-----NGVAISSPQRTSGRLSENVYKFTA----------- 312
            .....|...|..|  :..|||.|..     .|....:....:.:..:| .|||.           
Mosquito    97 RSNPTVGRLCPGR--HISAQLFWTAVLLLCAGFCTKTGCDDTEQFQKN-RKFTPTTATVDTIPAR 158

  Fly   313 ---AAEDNGANLVCEAKNLLATTPLRAE-------------LNLTVLYAPKDVYLSGANQAKVGD 361
               ||.|:.|.|.|:     .|.|...:             :.|..|.:...|.:|.|..:.:.:
Mosquito   159 IVWAAIDHDAELPCD-----ITAPSSQDGVKLVLWFKDSTGIPLYSLDSRSGVPISAAQHSTIAN 218

  Fly   362 SVQLSCVTAPSNPQARISWSINGRPLD-NSTYKTTSSSDGGWVSSSNISLTIDSQSRTFIAVCHA 425
            .:           ..|:.:|:...|.: ....:...:|||| |....:.. .:|.:|.:      
Mosquito   219 DL-----------GQRLFFSVGATPKEARLQIRNIKTSDGG-VYRCRVDY-FNSPTRNY------ 264

  Fly   426 LNTELTQNVVGSHTVNVLYPPSPPLLTGYNDGDI------LISGSILKLQCSSAGGNPPPTLQWY 484
             ...||..|          ||..|.:......:|      ...|..|.|.|..:||.|||.:.|:
Mosquito   265 -RVNLTLAV----------PPEEPRIFDAQGKEISTVAGPFREGHELFLSCQVSGGRPPPRVTWW 318

  Fly   485 KNDKIINA---PSKLV-DSKITSELSLLVNASDNNAIYKCKVQNAAI---DIPLFATK-TLGVHF 541
            ::...|::   ||.:. .|.:.::|.:.....|   .:..|:|..|.   .:|..:.: .:.||.
Mosquito   319 RDGVEISSTSHPSAVEGTSAMVNQLFISTVTRD---FFGSKLQCRAAGSKQVPAVSKEVAIQVHL 380

  Fly   542 PPETVKISVVPKNLVPGIRAKLICDSSSSNPPAKISWWKDGIPVEGLNLANRPGLWGGSVSTLEM 606
            .|..|||....:.|..|....:.|::..|.|.|||.|..||.|:...::.........::::..:
Mosquito   381 KPLRVKIISPNELLTAGRPVPIRCEAWGSFPAAKIVWLLDGEPLRSADITVHTDSNDANLTSSIL 445

  Fly   607 YVNITQDLDGIVYTCQSHNEVLQ-RSVHETISLDILYPP------KFETPQSTTFVGVEGAPFHV 664
            .:.:|.:.||...||::.|.... .|:.:...:.:.|.|      ..|.| |......||....:
Mosquito   446 TLRVTAENDGAELTCRASNPWFSGGSIEDKRIISVAYEPVVSVHLSNEDP-SRVITRAEGENVTL 509

  Fly   665 ELLASGNPMVITYTWTKDGLPISSNSLSGQRLISDGPRLNISRLSRNDAGVYICEALNSQG-TAL 728
            :..|...|.|.:::|.|:.:     .:||:    :|..|.:::|.|..||.|.|.|.|::| |..
Mosquito   510 KCRADARPPVTSFSWYKNNM-----RMSGE----NGETLYLTQLERESAGSYACAASNTEGETRS 565

  Fly   729 LEIQVAVEYAPTITAVSEGRSFVAGEPAV----LACHIQARPLEAAHVRWSRDGYDLATRTISSF 789
            ..:.:.:::||.....:|..|  .|...:    :.|.::|.|.:.....|:.:.    ||.:|..
Mosquito   566 SSLTLKIQFAPRCKPGTEQTS--VGSLNMHSLHVKCEVEADPPDGVRFSWTYNN----TRNVSPV 624

  Fly   790 ENG-------TALLQIASVERSDIGNFTCIVDNQRGAPAAQNVLLVVQTAPEIDHSPGFTRYAAR 847
            .|.       .:.:.......|::....|...|..|.          ||.|.:.|          
Mosquito   625 LNSRISSHGLVSTMTYLPQSDSELVTLACWAINNVGR----------QTVPCLIH---------- 669

  Fly   848 LGVRAQLICRSLASPQPSFIWRRHGKDLKMQRRNKFKSVERQVDALNFESALLIENTSPDDYGQY 912
                                                                ::....||.  ..
Mosquito   670 ----------------------------------------------------ILPAKIPDT--PR 680

  Fly   913 ECVVRNSLGQASTTLEFSKPSRPDAPLQLR-----VGNVSDTGVDLNWTPG----FDGGMQT--- 965
            .|.:.|     .|.||....:..|..|...     ||.|:....:|::|.|    ||..:.|   
Mosquito   681 NCELHN-----DTVLEVVCSAGSDGGLMQSFLLEVVGGVAPPAYNLDYTRGPPTEFDNEISTMND 740

  Fly   966 ------YFRLRLKQHGEDKYKYVDAKPGHQNISLDGLKPGATYYFSVMAANEAG----------- 1013
                  .||:   |....::|            |..|:||..|...|.|.|..|           
Mosquito   741 QATLAPLFRI---QEQIPQFK------------LHSLEPGRDYQLLVYAVNAKGKSDPPFVIDKV 790

  Fly  1014 --GSKFMPDI--KLTLSKGSQPHSAEYTEKDELPNVMIIGITSAAMVLLVLNAALVAWFV----I 1070
              ||..:|..  :..:|:...|....:.:|.:..:.|::....||.|.:::.:.:||.||    :
Mosquito   791 RVGSALVPPYVDETIISEDPTPAETSHQDKQKQQSQMVMFAAVAAAVGVIIASIIVAGFVAICRL 855

  Fly  1071 RRQNKSQSE-----AEPSNDDV---YSKDD-SQSVYKLPITALQADVQKKAAASTYLVENVDIIQ 1126
            :||...:.:     ..|:..||   |::|| ....|:     .|.||:...|:||        |:
Mosquito   856 KRQKPPEPQEVRKRMRPARTDVPSMYAEDDVFDDEYQ-----RQLDVRCSRASST--------IR 907

  Fly  1127 STAYPP----KYQESSM 1139
            |:.|..    :|.:.|:
Mosquito   908 SSRYVSEGFVQYSQPSL 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_788355.1 IG_like 45..137 CDD:214653
Ig strand B 56..60 CDD:409353
Ig strand C 68..72 CDD:409353
Ig strand E 91..105 CDD:409353
Ig strand F 115..120 CDD:409353
Ig strand G 128..131 CDD:409353
Ig 162..232 CDD:472250 7/32 (22%)
Ig strand B 162..167 CDD:409353
Ig strand C 177..181 CDD:409353
Ig strand E 207..211 CDD:409353 1/3 (33%)
Ig strand F 221..226 CDD:409353 1/4 (25%)
Ig 246..342 CDD:472250 24/127 (19%)
Ig strand B 269..273 CDD:409353 1/3 (33%)
Ig strand C 283..287 CDD:409353 2/3 (67%)
Ig strand F 320..325 CDD:409353 2/4 (50%)
Ig strand G 335..338 CDD:409353 0/15 (0%)
Ig 343..431 CDD:472250 14/88 (16%)
Ig strand B 363..367 CDD:409353 0/3 (0%)
Ig strand C 377..381 CDD:409353 1/3 (33%)
Ig strand E 406..410 CDD:409353 0/3 (0%)
Ig strand F 420..425 CDD:409353 0/4 (0%)
Ig 443..527 CDD:472250 22/93 (24%)
Ig strand B 466..470 CDD:409353 2/3 (67%)
Ig strand C 480..484 CDD:409353 0/3 (0%)
Ig strand E 503..507 CDD:409353 1/3 (33%)
Ig strand F 517..522 CDD:409353 0/4 (0%)
Ig 554..640 CDD:472250 19/86 (22%)
Ig strand B 561..565 CDD:409353 0/3 (0%)
Ig strand C 575..579 CDD:409353 2/3 (67%)
Ig strand E 602..608 CDD:409353 0/5 (0%)
Ig strand F 618..623 CDD:409353 2/4 (50%)
Ig strand G 633..636 CDD:409353 0/2 (0%)
Ig_3 643..722 CDD:464046 22/84 (26%)
Ig 748..829 CDD:472250 14/91 (15%)
Ig strand B 756..760 CDD:409353 0/7 (0%)
Ig strand C 769..775 CDD:409353 0/5 (0%)
Ig strand E 792..798 CDD:409353 0/12 (0%)
Ig strand F 808..813 CDD:409353 1/4 (25%)
Ig strand G 822..825 CDD:409353 0/2 (0%)
Ig_3 833..918 CDD:464046 5/84 (6%)
FN3 <932..1151 CDD:442628 58/258 (22%)
FN3 935..1017 CDD:238020 26/112 (23%)
sideXP_061499735.1 None
Blue background indicates that the domain is not in the aligned region.

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