DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hbs and LOC110439986

DIOPT Version :9

Sequence 1:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_021333824.1 Gene:LOC110439986 / 110439986 -ID:- Length:358 Species:Danio rerio


Alignment Length:450 Identity:117/450 - (26%)
Similarity:186/450 - (41%) Gaps:121/450 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 TLHLQPRAEDDYKEFSCEARHKALPPDVPMRAQVQLSVLYPPGAPFFEGYSQGETLHRGQEVQIA 272
            :||:.|                |..||.|:     :|:            ::...:..|..|.:.
Zfish    10 SLHVSP----------------ADAPDTPV-----ISI------------NRSAVIKEGDSVTLN 41

  Fly   273 CRSRGGNPPA-QLTWYRNGVAISSPQRTSGRLSENVYKFTAAAEDNGANLVCEAKNLLA---TTP 333
            | |...|||| ..:|::....:.         |..::..:..:.|:.....|:|||.|.   :.|
Zfish    42 C-SSNANPPALNFSWFKGETFVG---------SSRIFNISKISSDDNKKYKCKAKNDLGEKYSDP 96

  Fly   334 LRAELNLTVLYAPKDVYLSGANQAKV--GDSVQLSCVTAPSNPQARISWSINGRPLDNSTYKTTS 396
                :.|.|.|.|:::.:|....|.:  ||||.||| ::.|||.|.|||           ||..:
Zfish    97 ----VTLDVQYPPRNISVSMNRSAVIMSGDSVTLSC-SSDSNPPAEISW-----------YKGET 145

  Fly   397 SSDGGWVSSSNISLTIDSQSRTFIAVCHALNT--ELTQNVVGSHTVNVLYPPSPPLLTGYNDGDI 459
            |...|.:  .|||......|..:  .|.|.|.  |...:.|   |::|.|.|..|:::  |...:
Zfish   146 SVGSGRI--FNISKISSDDSGEY--KCRARNDHGEKYSDPV---TLDVQYAPDTPVIS--NRSAV 201

  Fly   460 LISGSILKLQCSSAGGNPPPTLQWYKNDKIINAPSKLVDSKITSELSLLVNASDNNAIYKCKVQN 524
            ::.|..:.|.||| ..|||....|:|.:|.:|:......|||         :||::..|||:.:|
Zfish   202 IMEGDSVTLNCSS-NSNPPANFSWFKGNKSLNSGRIFSISKI---------SSDDSGEYKCRARN 256

  Fly   525 A---AIDIPLFATKTLGVHFPPETVKISVVPKNLV-PGIRAKLICDSSSSNPPAKISWWKDGIPV 585
            .   ....|:    ||.|.:||..:.:|:....:: .|....|.| ||.|||||:|:|:|....|
Zfish   257 VHGEKYSDPV----TLDVQYPPRNISVSMNRSAVIMSGDSVTLSC-SSDSNPPAEINWFKGETSV 316

  Fly   586 EGLNLANRPGLWGGSVSTLEMYVNITQDLDGIVYTCQSHNEVLQRSVH-----ETISLDI 640
            ....:.|        :|      .|:.| |...|.|:..|      :|     :.::||:
Zfish   317 RSGRIFN--------IS------KISSD-DSGEYKCRYKN------IHGEKYSDPVTLDV 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_001286439.1 Ig 44..122 CDD:299845
IG_like 45..137 CDD:214653
Ig 153..231 CDD:299845 3/22 (14%)
IG_like 258..342 CDD:214653 18/87 (21%)
Ig 266..327 CDD:299845 13/61 (21%)
IG_like 357..>414 CDD:214653 22/58 (38%)
Ig 360..427 CDD:299845 24/66 (36%)
Ig <468..526 CDD:299845 20/60 (33%)
I-set 547..633 CDD:254352 23/86 (27%)
Ig 556..631 CDD:299845 22/75 (29%)
I-set 644..735 CDD:254352
IGc2 668..725 CDD:197706
IG_like 751..829 CDD:214653
IGc2 753..815 CDD:197706
Ig 852..928 CDD:143165
FN3 935..1017 CDD:238020
LOC110439986XP_021333824.1 Ig_2 22..101 CDD:316418 20/109 (18%)
Ig_2 115..186 CDD:316418 29/89 (33%)
Ig_2 193..270 CDD:316418 26/92 (28%)
Ig_2 284..355 CDD:316418 24/92 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141865at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.