DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hbs and si:ch211-180a12.2

DIOPT Version :9

Sequence 1:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_001920945.3 Gene:si:ch211-180a12.2 / 100150385 ZFINID:ZDB-GENE-121214-236 Length:903 Species:Danio rerio


Alignment Length:1041 Identity:206/1041 - (19%)
Similarity:338/1041 - (32%) Gaps:296/1041 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 DLQILEGTDTLLRCE------VSNRAGKVQWTKDGFAL--------GF---SAVIPGFPRYSVLV 94
            |:.:..|:.|:|.|.      |.|....:.|:..|..:        ||   |...|.||      
Zfish    22 DVSVSPGSSTVLNCSFALPALVDNSLLNITWSSGGSIIASKNHTQAGFFLNSTAFPSFP------ 80

  Fly    95 DAKQNAYNLQIKNATLEDDAEYQCQVGPAAGNPAIRANAKLSIVAAPSSIVIEGYARNARVEVEE 159
                    |.:.|||......|:|:|  :..:........|:|:|.|...:|...|...|..|.|
Zfish    81 --------LTVFNATPHQQGVYECRV--SYNDTDYATEVTLTIL
APPVVSIISPEAVLKRKSVVE 135

  Fly   160 RQNLTLHCIAEN-ANPAAEIVWFQGEVPVSTAPIVTVNQTAPKRFTTSSTLHLQPRAEDDYKEFS 223
                   |.|.: :.|.....|.:|...:.....:.||:|....:...|.|...|:..:....|.
Zfish   136 -------CWARSFSPPQIMFTWTRGGNKIQEPQKLQVNRTEDGLYDAVSFLTFIPQISNQNISFG 193

  Fly   224 CEARHKAL--------PPDVPMRAQVQLSVLYPPGAPFFEGYSQGETLHRGQEVQIACRSRGGNP 280
            ||.:|.||        .|.:.:..:|.|||:  |.:            .....|.::|...|..|
Zfish   194 CEVQHSALVKPV
LEEFTPHITVLPKVTLSVV--PSS------------SHSSSVTLSCDISGFYP 244

  Fly   281 -PAQLTWYRNGVAIS----SPQRTSGRLSENVY-KFTAAAEDNGANLVCEAKNLLATTPLRAELN 339
             ...:.|..||..:|    |.|...|....:.| ..|......|..:.|                
Zfish   245 NNISVLWIHNGKKLSELPLSIQNEDGTYRRHQYHTLTREERSRGGEVQC---------------- 293

  Fly   340 LTVLYAPKDVYLSGANQAKVGDSVQLSCV-TAPSNPQARISWSINGRPLDNSTYKTTSSSDGGWV 403
                     |.|..:.|.....::.||.| ....||      .:|         |:..:|    |
Zfish   294 ---------VALQPSGQEPANGTID
LSTVDLRVQNP------GLN---------KSAKAS----V 330

  Fly   404 SSSNISLTIDSQSRTFIAVCHALNTELTQNVVGSHTVNVLYPPSPPLLTGYNDGDILISGSILKL 468
            :...||||:     .|: :|...:.:.....:.|..::.:..| |.::.| ..|.:.|       
Zfish   331 AMMIISLTL-----VFL-LCFGFSWKRRDEKLKSLNISAIVLP-PRVVVG-KKGRVTI------- 380

  Fly   469 QCSSAGGNPPPTLQ--WYKNDKIINAPSKLVDSKITSELSLLVNASDNNAIYKCKVQNAAIDIPL 531
               |..|.....:|  |:.||         :..|.||.......|. .:|.|..:  |:::.:  
Zfish   381 ---SVEGRLAERVQTTWFLND---------IPIKDTSHKEKKYGAF-RSASYTSR--NSSVSV-- 428

  Fly   532 FATKTLGVHFPPETVKISVVPKNLVPGIRAKLICDSSSSNP--PAKISWWKDGIPVEGLNLANRP 594
                                               .|..||  |:..|.:        ..|..:.
Zfish   429 -----------------------------------LSEKNPLLPSSASGY--------YKLHTQM 450

  Fly   595 GLWGGSVSTLEMYVNIT--QDL---DGIVYTCQSHNEVLQRSVHETIS--LDILYPP-----KFE 647
            .|...|.|:.:::.::|  ..|   .|.|:.||...:...:.|.|.:|  ..||.||     :|.
Zfish   451 PLRSSSNSSKQLFSSVTFIPSLAVHKGSVFKCQVSYKGKDKIVAERVSEKFTILAPPEVSEIQFS 515

  Fly   648 TPQSTTFVGVEGAPFHVELLASG-NPMVITYTWTKDGLPISSNSLSGQRLISDGP---------- 701
            .|..      ||....:...||. :|.:||:.|..:|..:|..|:. |.|.:..|          
Zfish   516 EPNE------EGGVVTMTAHASHFHPDIITFRWFCEGGELSPVSIP-QALAAPRPDAEGFFSAMS 573

  Fly   702 --RLNISRLSRNDAGVYIC---EALNSQGTA-----LLEIQVAVEYAPTITAVSEGRSFVAGEPA 756
              ||..:.|.|.:..|::.   .||....|.     :.:..::...:..:.:|.|||       .
Zfish   574 QCRLPKAELERGETRVWVTIHHTALKQPITRQTRGFIKQPSISEILSCPVASVLEGR-------L 631

  Fly   757 VLACHIQARPLEAAHVRW-----------------SRDGYDL--ATRTISSFENGTALLQIASVE 802
            .|||.|.........|:|                 .:||.::  ..:|:.......|||:..: |
Zfish   632 TLACEITGFYPPEISVKWLHSKGNEIEDGDDSEEEIKDGAEVWGPLQTLPRTFRAKALLKDVN-E 695

  Fly   803 RSDIGNFTCIVDNQRGAPAAQNVLLVVQT-APEIDHSPGFTRYAARLGVRAQLICRSLASPQPSF 866
            .:..|...|.|.:.........|.....| ||.|..|......:..:|:.:.::|.  ..|....
Zfish   696 MTRGGQIICRVSHCCLLKPVDRVWRNTHTVAPSIPPSLSVHWSSDGVGIFSIVLCG--GRPSAEV 758

  Fly   867 IWRRHGKDLKMQRRNKFKSVERQVDALNFESALLIENTSPDDYGQYECVVRNSLGQASTTLEFSK 931
            :|...|..|     ::.:|.||:.:  |.|..|.:::.         |.:..|.|:..:......
Zfish   759 LWAAGGSTL-----SRLQSKERERE--NNEGKLELKSV---------CALVRSTGRKDSESRRGT 807

  Fly   932 PSRPDAPLQLRVGNVSDTGVDLNW-----TPGFDG--GMQTYFRLRLKQHGEDKYKYVDAKPGHQ 989
            .:|...|          ..||.|.     ....||  .:|...:....:|.::..:..|..|.|.
Zfish   808 HARKIRP----------PSVDFNTDYEKVNECVDGLKSVQEEKQPEPNKHTKENDENEDMHPSHV 862

  Fly   990 N 990
            |
Zfish   863 N 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbsNP_001286439.1 Ig 44..122 CDD:299845 22/91 (24%)
IG_like 45..137 CDD:214653 23/106 (22%)
Ig 153..231 CDD:299845 18/78 (23%)
IG_like 258..342 CDD:214653 15/89 (17%)
Ig 266..327 CDD:299845 15/66 (23%)
IG_like 357..>414 CDD:214653 13/57 (23%)
Ig 360..427 CDD:299845 15/67 (22%)
Ig <468..526 CDD:299845 13/59 (22%)
I-set 547..633 CDD:254352 15/92 (16%)
Ig 556..631 CDD:299845 15/81 (19%)
I-set 644..735 CDD:254352 25/116 (22%)
IGc2 668..725 CDD:197706 19/72 (26%)
IG_like 751..829 CDD:214653 17/96 (18%)
IGc2 753..815 CDD:197706 16/80 (20%)
Ig 852..928 CDD:143165 14/75 (19%)
FN3 935..1017 CDD:238020 12/63 (19%)
si:ch211-180a12.2XP_001920945.3 Ig 19..114 CDD:299845 23/107 (21%)
IG_like 22..113 CDD:214653 23/106 (22%)
C1-set 123..205 CDD:284964 21/88 (24%)
IgC 237..309 CDD:143166 17/96 (18%)
IgC 515..604 CDD:143166 22/95 (23%)
IgC 609..720 CDD:143166 21/118 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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