DRSC/TRiP Functional Genomics Resources

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Protein Alignment lmgB and Fam89a

DIOPT Version :10

Sequence 1:NP_001097124.1 Gene:lmgB / 44128 FlyBaseID:FBgn0085470 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001074589.1 Gene:Fam89a / 69627 MGIID:1916877 Length:175 Species:Mus musculus


Alignment Length:193 Identity:58/193 - (30%)
Similarity:77/193 - (39%) Gaps:66/193 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GLPPLPKSLSAATAAPVAIGPHPRTASPASSVNALTVAAGELYLGPSTSSSAASRNRSYNGHGHS 79
            ||||||||||                             |.|:   |.:..||      .|..|.
Mouse    17 GLPPLPKSLS-----------------------------GLLH---SAAGGAA------GGWRHL 43

  Fly    80 QR-HGSLSSTQESLSDRESVHSRASSTHSAGAVHTPTNSSSSTGATSSTIDNQLAILRREMYGLR 143
            :| :...|..|:.|:   ...:......:||....|.|           :|..||:||:||.|||
Mouse    44 ERLYAQKSRIQDELN---RGGAGGGGARAAGMRTKPPN-----------LDAALALLRKEMVGLR 94

  Fly   144 QLDLSLLSQLWALNESIQGFRVFLQEQDALSPPSRSRTPSDANSLSSDEED--------DGSY 198
            |||:|||.||::|.||||.::...|...:|     ..|.:..|....||||        ||.:
Mouse    95 QLDMSLLCQLYSLYESIQEYKGACQAASSL-----DCTYALENGFFDDEEDFQEQGSLQDGQH 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lmgBNP_001097124.1 None
Fam89aNP_001074589.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 141..175 2/12 (17%)

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