DRSC/TRiP Functional Genomics Resources

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Protein Alignment lmgB and FAM89B

DIOPT Version :10

Sequence 1:NP_001097124.1 Gene:lmgB / 44128 FlyBaseID:FBgn0085470 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001092255.1 Gene:FAM89B / 23625 HGNCID:16708 Length:189 Species:Homo sapiens


Alignment Length:209 Identity:67/209 - (32%)
Similarity:85/209 - (40%) Gaps:70/209 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LTGLPPLPKSLSAATAAPVAIGPHPRTASPASSVNALTVAAGELYLGPSTSSSAASRNRSYNGHG 77
            |.||||||:.||                       .|..|:|                       
Human    17 LAGLPPLPRGLS-----------------------GLLNASG----------------------- 35

  Fly    78 HSQRHGSLSSTQESLSDRESVH---SRASST-----HSAGAVHTPTNSSSSTGATSS-TIDNQLA 133
                 ||....:...|.|..:|   |||:..     |:|||    .|:..:.|.... .:|:.||
Human    36 -----GSWRELERVYSQRSRIHDELSRAARAPDGPRHAAGA----ANAGPAAGPRRPVNLDSALA 91

  Fly   134 ILRREMYGLRQLDLSLLSQLWALNESIQGFRVFLQE----QD-ALSPPSRSRTPSDANSLSSDEE 193
            .||:||.||||||:|||.|||.|.||||.::...|:    || :.|..|.|..|.|| .||.|||
Human    92 ALRKEMVGLRQLDMSLLCQLWGLYESIQDYKHLCQDLSFCQDLSSSLHSDSSYPPDA-GLSDDEE 155

  Fly   194 DDGSYAPVALPKMT 207
            ...:..|...|.:|
Human   156 PPDASLPPDPPPLT 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lmgBNP_001097124.1 None
FAM89BNP_001092255.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..83 9/32 (28%)
LRR. /evidence=ECO:0000250|UniProtKB:Q566R4 86..114 19/27 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 141..175 12/30 (40%)

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