DRSC/TRiP Functional Genomics Resources

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Protein Alignment lmgB and Fam89b

DIOPT Version :10

Sequence 1:NP_001097124.1 Gene:lmgB / 44128 FlyBaseID:FBgn0085470 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_852117.2 Gene:Fam89b / 17826 MGIID:106595 Length:189 Species:Mus musculus


Alignment Length:209 Identity:68/209 - (32%)
Similarity:86/209 - (41%) Gaps:70/209 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LTGLPPLPKSLSAATAAPVAIGPHPRTASPASSVNALTVAAGELYLGPSTSSSAASRNRSYNGHG 77
            |.||||||:.||                       .|..|:|                       
Mouse    17 LAGLPPLPRGLS-----------------------GLLNASG----------------------- 35

  Fly    78 HSQRHGSLSSTQESLSDRESVH---SRASST-----HSAGAVHTPTNSSSSTGATSS-TIDNQLA 133
                 ||....:...|.|..:|   |||:..     |:||:    .||.|:.|.... .:|:.||
Mouse    36 -----GSWRELERVYSQRSRIHDELSRAARAPDGPRHAAGS----ANSGSAAGPRRPVNLDSALA 91

  Fly   134 ILRREMYGLRQLDLSLLSQLWALNESIQGFRVFLQE----QD-ALSPPSRSRTPSDANSLSSDEE 193
            .||:||.||||||:|||.|||.|.||||.::...|:    || :.|..|.|..|.|| .||.|||
Mouse    92 ALRKEMVGLRQLDMSLLCQLWGLYESIQDYKHLCQDLSLCQDLSSSLHSDSSYPPDA-GLSDDEE 155

  Fly   194 DDGSYAPVALPKMT 207
            ...:..|...|.:|
Mouse   156 PPDASLPPDPPPLT 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lmgBNP_001097124.1 None
Fam89bNP_852117.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..82 10/31 (32%)
LRR. /evidence=ECO:0000250|UniProtKB:Q566R4 86..114 19/27 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..175 14/35 (40%)

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