DRSC/TRiP Functional Genomics Resources

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Protein Alignment lmgB and fam89b

DIOPT Version :10

Sequence 1:NP_001097124.1 Gene:lmgB / 44128 FlyBaseID:FBgn0085470 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_021327967.1 Gene:fam89b / 100151239 ZFINID:ZDB-GENE-091204-269 Length:174 Species:Danio rerio


Alignment Length:196 Identity:50/196 - (25%)
Similarity:76/196 - (38%) Gaps:65/196 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GLPPLPKSLSAATAAPVAIGPHPRTASPASSVNALTVAAGELYLGPSTSSSAASRNRSYNGHGHS 79
            |||||||.||                                                       
Zfish    21 GLPPLPKGLS------------------------------------------------------- 30

  Fly    80 QRHGSLSSTQESLSDRESVHSRASSTHSAGAVHTPTNSSSSTGATSSTIDNQLAILRREMYGLRQ 144
               |.|:|:..|..|.|.|:|:  .|.....:.....|.....:..:::|..||:||::|.||||
Zfish    31 ---GILNSSGGSWRDIEKVYSK--RTRIQADISKSRVSDCLERSKPASLDAALAVLRKDMVGLRQ 90

  Fly   145 LDLSLLSQLWALNESIQGFRVFLQEQDALSPPSRSRTPSDANSLSSDEEDDGSYA-----PVALP 204
            ||:|||.|||:|.||||.::...|:..:....|...|.:..:....:|::|...|     |::.|
Zfish    91 LDMSLLCQLWSLYESIQEYKGAFQDISSSLCESSFNTENGYSEEEEEEDEDDHEAERGDTPLSFP 155

  Fly   205 K 205
            :
Zfish   156 Q 156

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