DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and galr2b

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_001339169.1 Gene:galr2b / 798737 ZFINID:ZDB-GENE-131121-48 Length:378 Species:Danio rerio


Alignment Length:327 Identity:122/327 - (37%)
Similarity:186/327 - (56%) Gaps:28/327 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 TDHSD------H-NANDSMEYDAESVALERIVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQM- 105
            :||.|      | ||::|.:.:..||        ||.|.|.:|...|.:||.||:.|::.:.|: 
Zfish     2 SDHEDLNKAMGHWNASESYQLNPASV--------IVSVVFSLIFLLGTIGNSLVLAVLLRSGQVG 58

  Fly   106 RSTTNLLIINLAVSDILFVIFCVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSF 170
            .:||||.|:||:|:|..|:||||||.||.|.|..|.||:..||.|.:.|.:|.:.|.:||..:|.
Zfish    59 YNTTNLFILNLSVADFFFIIFCVPFQATIYSLEGWVFGSFMCKVVHFFINLTMYASSFTLAAVSV 123

  Fly   171 DRFLAVVHPVTSMSLRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEE 235
            ||:||:.:|:.|..|||..||.:|::..|...:..|.|. ||:...|...:.|   .||...||.
Zfish   124 DRYLAIRYPLRSRELRTPCNAVVAMVVIWGLSLVFAGPY-LSYYDLIDFENSN---VCVPGWEEH 184

  Fly   236 IWSLVGFQVSFFLSSYVAPLTLICFLYMGMLARLWKSAPGCKPSAESRKGKRRVTRMVVVVVLAF 300
            ...::  ....|:..||.|:.::...|...:..||.:.......:||::.||:||:|:::|.:.|
Zfish   185 NRKVL--DTCTFVFGYVIPVLIVSLSYTRTIKYLWTAVDPLDGMSESKRAKRKVTKMIIIVTVLF 247

  Fly   301 AICWLPIHVILVLKALNLYGG---SHLSVIIQIISHVVAYTNSCINPILYAFLSDNFRKAFRKVV 362
            .|||||.||:::   ..|||.   :..:...:::||.:||.|||:|||:||.:|.:|||.|:||.
Zfish   248 CICWLPYHVVIL---CYLYGDFPFNQTTYAFRLLSHCMAYANSCLNPIVYALVSKHFRKGFKKVF 309

  Fly   363 WC 364
            .|
Zfish   310 SC 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 63/157 (40%)
7tm_1 91..347 CDD:278431 97/259 (37%)
galr2bXP_001339169.1 7tmA_Gal2_Gal3_R 27..305 CDD:320225 110/294 (37%)
TM helix 1 29..53 CDD:320225 10/23 (43%)
TM helix 2 63..85 CDD:320225 14/21 (67%)
TM helix 3 101..123 CDD:320225 7/21 (33%)
TM helix 4 146..162 CDD:320225 3/15 (20%)
TM helix 5 187..210 CDD:320225 4/24 (17%)
TM helix 6 237..259 CDD:320225 11/21 (52%)
TM helix 7 273..298 CDD:320225 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 185 1.000 Domainoid score I3307
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 223 1.000 Inparanoid score I3501
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 1 1.000 - - FOG0000972
OrthoInspector 1 1.000 - - mtm6485
orthoMCL 1 0.900 - - OOG6_105726
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3950
SonicParanoid 1 1.000 - - X1132
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.900

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