DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R1 and qrfpr

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_012820557.1 Gene:qrfpr / 779748 XenbaseID:XB-GENE-994316 Length:456 Species:Xenopus tropicalis


Alignment Length:357 Identity:105/357 - (29%)
Similarity:163/357 - (45%) Gaps:58/357 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 IIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDILFVIFCVPFTATDYVLPEWPFGNVWC 147
            :|....|.||.||:.||..::.||:.||:.|.:||:||:|...||:|||....:...|..|...|
 Frog    88 LIFVLALFGNSLVLYVVTRSKAMRTVTNIFICSLALSDLLIAFFCIPFTMLQNISSNWLGGAFAC 152

  Fly   148 K---FVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCAWITIVTTAIPV 209
            |   |||...:||   .:.|:..::.:|...:|||:......|.|.|...:...|:......|| 
 Frog   153 KMVPFVQSTAIVT---EILTMTCIAVERHQGIVHPLKMKWQYTNRRAFTMLGIVWLIAAVVGIP- 213

  Fly   210 ALSHSVRI---YQYHGNAGTACVFSTEEEIWSLVGFQ---VSFFL-SSYVAPLTLICFLYMGMLA 267
             :.|:.|:   |.:.......|..    |.|:....|   .:|.| ..::.|||::..||..:..
 Frog   214 -MWHAQRLEVKYDFLYEKQYVCCL----EAWNSQVHQKIYTTFILVILFLLPLTVMLLLYSKIGY 273

  Fly   268 RLW-----------KSAPGCKPSAESRKGKRRVTRMVVVVVLAFAICWLPIHVILVLKALNLYGG 321
            .||           ::..|.:.|..:||.||.:..|:.|||| ||:||.|.||:.::...:.:..
 Frog   274 ELWIKKRVGDASVLQTIHGSEMSKIARKKKRAIIMMITVVVL-FAVCWAPFHVVHMMIEYSNFEN 337

  Fly   322 SHLSVIIQI---ISHVVAYTNSCINPILYAFLSDNFRKAFRKVV-WC-----GSPPPLMTNQQVT 377
            .:..|.|:|   |..::.:.||..|||:|||:::||:|.|...: :|     .||.....|..:|
 Frog   338 EYDDVTIKIIFAIVQIIGFFNSICNPIVYAFMNENFKKNFLSALCFCFLRDPSSPSRRPGNSGIT 402

  Fly   378 ----------------KTTRTATGNGTSNIEM 393
                            .|.|.|...|  |||:
 Frog   403 LIQQKSSSSRRENTCEDTRREAFSEG--NIEV 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 92/298 (31%)
TM helix 1 76..102 CDD:320224 8/18 (44%)
TM helix 2 109..135 CDD:320224 13/25 (52%)
TM helix 3 147..177 CDD:320224 9/32 (28%)
TM helix 4 189..209 CDD:320224 4/19 (21%)
TM helix 5 239..268 CDD:320224 8/32 (25%)
TM helix 6 284..314 CDD:320224 15/29 (52%)
TM helix 7 326..351 CDD:320224 12/27 (44%)
qrfprXP_012820557.1 7tmA_QRFPR 80..377 CDD:320333 92/298 (31%)
TM helix 1 81..107 CDD:320333 8/18 (44%)
TM helix 2 114..140 CDD:320333 13/25 (52%)
TM helix 3 152..182 CDD:320333 9/32 (28%)
TM helix 4 195..216 CDD:320333 4/22 (18%)
TM helix 5 245..270 CDD:320333 8/24 (33%)
TM helix 6 300..330 CDD:320333 16/30 (53%)
TM helix 7 345..370 CDD:320333 10/24 (42%)

Return to query results.
Submit another query.