DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R1 and Gpr15

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001156427.1 Gene:Gpr15 / 71223 MGIID:1918473 Length:360 Species:Mus musculus


Alignment Length:329 Identity:86/329 - (26%)
Similarity:150/329 - (45%) Gaps:31/329 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 DHSDHNANDSMEYDAESVALERIVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLII 114
            |:.|:.:.|....:..|..  ...|..:|:|:.::...|::||.::::.:...:..|...::.||
Mouse    11 DYYDYTSPDPPFLETPSHL--SYTSVFLPIFYTVVFLTGVVGNFILMIALHFKRGNRRLIDIFII 73

  Fly   115 NLAVSDILFVIFCVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHP 179
            |||.||.:|::....:...:..|..|..|:..||...|:|.|..||||:.|..||.||:||::||
Mouse    74 NLAASDFIFLVTVPLWMDKEASLGLWRTGSFLCKGSSYVISVNMHCSVFLLTCMSMDRYLAIMHP 138

  Fly   180 VTSMSLRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEEI---WSLVG 241
            ..:..||...:|.......||......:|..||..:.    |......|.......:   |.||.
Mouse   139 ALAKRLRRRSSAYAVCAVVWIISCVLGLPTLLSRELT----HIEGKPYCAEKKPTSLKLMWGLVA 199

  Fly   242 FQVSFFLSSYVAPLTLICFLYMGMLARLWKSAPGC---KPSAESRKGKRRVTRMVVVVVLAFAIC 303
            ...:||:     ||..|...|..:..||      |   :.|.:..|..::..::|::.|.||.:.
Mouse   200 LITTFFV-----PLLSIVTCYCCITRRL------CAHYQQSGKHNKKLKKSIKIVIIAVAAFTVS 253

  Fly   304 WLPIHVILVLKALNLY--GGSHLSVIIQIISHV---VAYTNSCINPILYAFLSDNFRKAFRKVVW 363
            |:|.:...:|..::.:  .|...|..:|:..:|   :|:.:||:||::|.......|:|   :|.
Mouse   254 WVPFNTFKLLAIVSGFQPEGLFHSEALQLAMNVTGPLAFASSCVNPLIYYVFDSYIRRA---IVR 315

  Fly   364 CGSP 367
            |..|
Mouse   316 CLCP 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 44/159 (28%)
7tm_1 91..347 CDD:278431 72/266 (27%)
Gpr15NP_001156427.1 7tm_1 50..302 CDD:278431 72/266 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.