DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and prlhr2a

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001034615.1 Gene:prlhr2a / 654782 ZFINID:ZDB-GENE-060209-1 Length:370 Species:Danio rerio


Alignment Length:354 Identity:110/354 - (31%)
Similarity:174/354 - (49%) Gaps:45/354 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ISVSNSS-GNNYAFTSEHTDHSDHNANDSMEYDAESVALERIVS---TIVPVFFGIIGFAGLLGN 92
            :::.||| |..|....:.|:.:..|        .:.|.:|.:.|   .|:|. :.::...|:.||
Zfish    21 VTMENSSVGRIYEVMLQSTNSTKRN--------PQFVGVELLQSFKPLIIPC-YALVVLVGVFGN 76

  Fly    93 GLVILVVVANQQMRSTTNLLIINLAVSDILFVIFCVPFTATDYVLPE-WPFGNVWCKFVQYMIVV 156
            .|::.|:...::|.:.||..|.|||.||:|....|||||......|. |.||...|..|..:..|
Zfish    77 YLLLYVICQTKKMHNVTNFFIGNLAFSDMLMCATCVPFTLAYAFNPRGWVFGRFMCYLVFLIQPV 141

  Fly   157 TCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCA------WITIVTTAIPVALSHSV 215
            |.:.||:||..:..||:.|.|||:      .:|.:.||  |.      ||.......| |::|:.
Zfish   142 TVYVSVFTLTAIGVDRYYATVHPL------KKRISVLA--CTYLLSGIWILSCGLVAP-AVAHTY 197

  Fly   216 RIYQYHGNAGTACVFSTEEEIW-----SLVGFQVSFFLSSYVAPLTLICFLYMGMLARLWKS-AP 274
            .: ::.....|.|     ||.|     ..:.:..|....:||.||:.:|..|:.:..:|... .|
Zfish   198 HV-EFKDEGFTIC-----EEFWMGQEKERLAYAYSTLFITYVLPLSALCISYLCISVKLRNCVVP 256

  Fly   275 G--CKPSAESRKGKRRVT-RMVVVVVLAFAICWLPIHVILVLKALNL-YGGSHLSVIIQIISHVV 335
            |  .:..||:::.::|.| |:|.:||.||.||||||.|..||:.::: .......::||::.|:.
Zfish   257 GHRTQSQAEAQRARKRKTFRLVSLVVAAFGICWLPISVFNVLRDIDIDLIDKRYFLLIQLLCHLC 321

  Fly   336 AYTNSCINPILYAFLSDNFRKAFRKVVWC 364
            ..::||.||.|||:|.|.||...||:..|
Zfish   322 GMSSSCCNPFLYAWLHDRFRAELRKMFTC 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 97/299 (32%)
TM helix 1 76..102 CDD:320224 7/25 (28%)
TM helix 2 109..135 CDD:320224 14/25 (56%)
TM helix 3 147..177 CDD:320224 11/29 (38%)
TM helix 4 189..209 CDD:320224 6/25 (24%)
TM helix 5 239..268 CDD:320224 7/28 (25%)
TM helix 6 284..314 CDD:320224 16/30 (53%)
TM helix 7 326..351 CDD:320224 10/24 (42%)
prlhr2aNP_001034615.1 7tmA_PrRP_R 59..344 CDD:320516 97/300 (32%)
TM helix 1 60..86 CDD:320516 7/26 (27%)
TM helix 2 93..118 CDD:320516 14/24 (58%)
TM helix 3 132..162 CDD:320516 11/29 (38%)
TM helix 4 173..194 CDD:320516 6/23 (26%)
TM helix 5 220..249 CDD:320516 7/28 (25%)
TM helix 6 269..299 CDD:320516 16/29 (55%)
TM helix 7 312..337 CDD:320516 10/24 (42%)

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