DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and kiss1ra

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001099149.2 Gene:kiss1ra / 561898 ZFINID:ZDB-GENE-070912-521 Length:366 Species:Danio rerio


Alignment Length:353 Identity:118/353 - (33%)
Similarity:193/353 - (54%) Gaps:34/353 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NDSME--YDAESVALERIVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVS 119
            |.|||  .|.|...|..  :.:||:||.:|...||:||.|||.|:..::|||:.||..|.|||.:
Zfish    19 NSSMEDSEDGEHPFLTD--AWLVPLFFSLIMLVGLIGNSLVIYVISKHRQMRTATNFYIANLAAT 81

  Fly   120 DILFVIFCVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMS 184
            ||:|::.|||||||.|.||.|.||:..||||.::..||...:..||..||.||....|:|:.|:.
Zfish    82 DIIFLLCCVPFTATLYPLPGWIFGDFMCKFVAFLQQVTVQATCITLTAMSGDRCYVTVYPLKSLH 146

  Fly   185 LRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACV--FSTEEEIWSLVGFQVSFF 247
            .||.|.|.:..:|.||.....:||:.|...:....::| ....|:  |.::....:.:.:|   |
Zfish   147 HRTPRVAMIVSICIWIGSFILSIPIFLYQRLEDGYWYG-PRKYCMERFPSKTHEKAFILYQ---F 207

  Fly   248 LSSYVAPLTLICFLYMGMLARLWKSAPGCKP----------SAESRKGKRRVTRMVVVVVLAFAI 302
            ::.|:.|:..|.|.|..||.|:.:::  .:|          |..:...:.::::||||:|:.|.|
Zfish   208 IAVYLLPVITISFCYSFMLKRVGQAS--VEPVDNNHQVHLLSERTISIRSKISKMVVVIVVLFTI 270

  Fly   303 CWLPIHVILVLKAL--NLYGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNFRKAFRKVVWCG 365
            ||.||.:.::.::.  | :..::.:..|:..::.::|.||.||||:|.|:..:|||:|||..   
Zfish   271 CWGPIQIFVLFQSFYPN-FKANYATYKIKTWANCMSYANSSINPIVYGFMGASFRKSFRKTF--- 331

  Fly   366 SPPPLMTNQQVTKTTRTATGNGTSNIEM 393
               |.:...:|..   ::..:.|:|.|:
Zfish   332 ---PFLFRHKVRD---SSVASRTANAEI 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 103/296 (35%)
TM helix 1 76..102 CDD:320224 13/25 (52%)
TM helix 2 109..135 CDD:320224 16/25 (64%)
TM helix 3 147..177 CDD:320224 12/29 (41%)
TM helix 4 189..209 CDD:320224 6/19 (32%)
TM helix 5 239..268 CDD:320224 9/28 (32%)
TM helix 6 284..314 CDD:320224 11/29 (38%)
TM helix 7 326..351 CDD:320224 10/24 (42%)
kiss1raNP_001099149.2 7tmA_KiSS1R 37..327 CDD:320223 103/296 (35%)
TM helix 1 38..64 CDD:320223 13/25 (52%)
TM helix 2 71..97 CDD:320223 16/25 (64%)
TM helix 3 109..139 CDD:320223 12/29 (41%)
TM helix 4 151..171 CDD:320223 6/19 (32%)
TM helix 5 199..228 CDD:320223 9/31 (29%)
TM helix 6 252..282 CDD:320223 11/29 (38%)
TM helix 7 295..320 CDD:320223 10/24 (42%)

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