DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and nmbr

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_690325.2 Gene:nmbr / 561834 ZFINID:ZDB-GENE-041014-369 Length:372 Species:Danio rerio


Alignment Length:363 Identity:110/363 - (30%)
Similarity:174/363 - (47%) Gaps:30/363 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 EHTDHSDHNANDSMEYDAESVALER---IVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRST 108
            :||...|....::...|..|...|.   |:..::|..:.:|...|||||..::.:.:....|||.
Zfish     2 DHTFSEDTAVYENFTEDWTSDGGETVHFIIQCVIPSVYILIITVGLLGNITLVKIFITTSAMRSV 66

  Fly   109 TNLLIINLAVSDILFVIFCVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRF 173
            .|:.|.:|||.|:|.::.|||..|..|...||.||.|.||.:..:.:.:...||:||..:|.||.
Zfish    67 PNIFISSLAVGDLLLLVTCVPVDAFRYFYEEWIFGTVACKMIPVIQLTSVGVSVFTLTALSADRH 131

  Fly   174 LAVVHPVTSMSLRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACV-FSTEEEIW 237
            .|:|:|:...|........|..:..|:..|..|||.|:...|..........|||| :....|:.
Zfish   132 KAIVNPMDIQSSSAVFWTCLKAITIWVVSVLLAIPEAVFSQVVHMPDKNTTFTACVPYPLSNEMH 196

  Fly   238 SLVGFQVSFFLSSYVAPLTLICFLYMGMLARLWKSA---PG-----CKPSAESRKGKRRVTRMVV 294
            ..: ..:..||..::.||::|...|..:...|.|||   ||     .|...|:||   |:.::|:
Zfish   197 PKI-HSIMIFLVYFLIPLSIISVYYYHIARTLIKSAHDMPGEISEHSKRQTETRK---RLAKIVL 257

  Fly   295 VVVLAFAICWLPIHVILVLKALNL----YGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNFR 355
            |.|..||:||.|.||:.:.::.|.    ...|||  ||.:::.|:::::||:||.....||::||
Zfish   258 VFVGLFALCWFPNHVLYMYRSFNYRQIDSSLSHL--IITLVARVLSFSSSCVNPFALYLLSESFR 320

  Fly   356 KAFRKVVWCGSPPPLMTNQQVTKTTRTATGNGTSNIEM 393
            :.|...:.|        .|:..:...|:....||.|.|
Zfish   321 RHFNNQLLC--------RQRKYQERNTSYLQSTSAIRM 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 95/295 (32%)
TM helix 1 76..102 CDD:320224 7/25 (28%)
TM helix 2 109..135 CDD:320224 11/25 (44%)
TM helix 3 147..177 CDD:320224 10/29 (34%)
TM helix 4 189..209 CDD:320224 5/19 (26%)
TM helix 5 239..268 CDD:320224 6/28 (21%)
TM helix 6 284..314 CDD:320224 12/29 (41%)
TM helix 7 326..351 CDD:320224 7/24 (29%)
nmbrXP_690325.2 7tm_GPCRs 33..323 CDD:475119 95/295 (32%)
TM helix 1 35..59 CDD:410628 7/23 (30%)
TM helix 2 68..90 CDD:410628 10/21 (48%)
TM helix 3 106..128 CDD:410628 5/21 (24%)
TM helix 4 151..167 CDD:410628 5/15 (33%)
TM helix 5 198..221 CDD:410628 5/23 (22%)
TM helix 6 253..275 CDD:410628 10/21 (48%)
TM helix 7 291..316 CDD:410628 8/26 (31%)

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